RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OLFM2O95897 454 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 ZBED1O96006 694 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 RARGP13631 454 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 CHRNB2P17787 502 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 KRT9P35527 623 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 BPIFB4P59827 614 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
VEGFA-224ENST00000523873 PDCLQ13371 301 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 HECTD3Q5T447 861 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 SNX30Q5VWJ9 437 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 E4F1Q66K89 784 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-224ENST00000523873 PM20D1Q6GTS8 502 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
VEGFA-224ENST00000523873 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 WBP2Q969T9 261 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 NXPE3Q969Y0 559 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 TTYH3Q9C0H2 523 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 TDP1Q9NUW8 608 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 CPQQ9Y646 472 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 VCANP13611 3396 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 ATG2BQ96BY7 2078 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 YJEFN3A6XGL0 299 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 E5RJQ4 531 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 E7ENQ6 273 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 TLR5O60602 858 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 SRFP11831 508 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 PSMC3P17980 439 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 WEE1P30291 646 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 GDI1P31150 447 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 DAOAP59103 153 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 USP4Q13107 963 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 BPIFB1Q8TDL5 484 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 EDEM1Q92611 657 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 EDAQ92838 391 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 TRMT61BQ9BVS5 477 aaKnown RBP13.47□□□□□ -0.25
VEGFA-224ENST00000523873 NACA2Q9H009 215 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
VEGFA-224ENST00000523873 ZMYM5Q9UJ78 669 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
VEGFA-224ENST00000523873 TTC28Q96AY4 2481 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 SOBPA7XYQ1 873 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 LEFTY2O00292 366 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 PAPSS1O43252 624 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ERBB2P04626 1255 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 IRF1P10914 325 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ALADP13716 330 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 RPL34P49207 117 aaKnown RBP13.46□□□□□ -0.25
VEGFA-224ENST00000523873 SLC7A9P82251 487 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 FMO1Q01740 532 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ZNF77Q15935 545 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 MEA1Q16626 185 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 C10orf120Q5SQS8 335 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 DEPDC1BQ8WUY9 529 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 E2F7Q96AV8 911 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 PIWIL1Q96J94 861 aaKnown RBP13.46□□□□□ -0.25
VEGFA-224ENST00000523873 PPP1R13BQ96KQ4 1090 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
VEGFA-224ENST00000523873 PCDHB18PQ96TA0 734 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 BRD9Q9H8M2 597 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 CYLDQ9NQC7 956 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 WNT6Q9Y6F9 365 aa13.46□□□□□ -0.25
VEGFA-224ENST00000523873 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.26
VEGFA-224ENST00000523873 ZNF263O14978 683 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 CBFA2T2O43439 604 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-224ENST00000523873 RALAP11233 206 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 FERP16591 822 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 PFKLP17858 780 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 TUBP50607 506 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 CDR2Q01850 454 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 TNK2Q07912 1038 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 FCHO2Q0JRZ9 810 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 EFEMP1Q12805 493 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 MTF1Q14872 753 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 ASIC2Q16515 512 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 NAA35Q5VZE5 725 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 BSPRYQ5W0U4 402 aa13.45□□□□□ -0.26
VEGFA-224ENST00000523873 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms