RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ACER1Q8TDN7 264 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 SLC44A1Q8WWI5 657 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 RSAD1Q9HA92 442 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 TBC1D23Q9NUY8 699 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 PTTG2Q9NZH5 202 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 CLUHO75153 1309 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 IGLV3-22A0A075B6J6 115 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 GPC4O75487 556 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 TCF4P15884 667 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 SFNP31947 248 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 SFT2D3Q587I9 215 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 N4BP2L1Q5TBK1 243 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 NKD2Q969F2 451 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 TMEM143Q96AN5 459 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 AGBL1Q96MI9 1066 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 P2RX7Q99572 595 aaKnown RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 EBF4Q9BQW3 602 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 LMCD1Q9NZU5 365 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 HBS1LQ9Y450 684 aaKnown RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 PCDHA10Q9Y5I2 948 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 SEC24DO94855 1032 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 FDFT1P37268 417 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 INHBEP58166 350 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 KLF1Q13351 362 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 LSAMPQ13449 338 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PRKG1Q13976 671 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 MSS51Q4VC12 460 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 LRRC8BQ6P9F7 803 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 HHIPL2Q6UWX4 724 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 RTKN2Q8IZC4 609 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 CCNYQ8ND76 341 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 DCAKDQ8WVC6 231 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 USP13Q92995 863 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TARS2Q9BW92 718 aaKnown RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 RAVER2Q9HCJ3 691 aaKnown RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 AP4B1Q9Y6B7 739 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 M0QYV0 167 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PEX1O43933 1283 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 GRAP2O75791 330 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PSAPP07602 524 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 GDF10P55107 478 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PEX6Q13608 980 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 GEN1Q17RS7 908 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TKFCQ3LXA3 575 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 KCTD21Q4G0X4 260 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 LRRC38Q5VT99 294 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 BNC2Q6ZN30 1099 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 DNAAF3Q8N9W5 541 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 C7orf26Q96N11 449 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 FRMD8P1Q9BZ68 369 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 C20orf96Q9NUD7 363 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TLK1Q9UKI8 766 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 CDY2AQ9Y6F7 541 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 CDY1Q9Y6F8 540 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 MYPNQ86TC9 1320 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 APOL1O14791 398 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 GLRA3O75311 464 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TMEM63AO94886 807 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 ASLP04424 464 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 GARTP22102 1010 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 CRABP2P29373 138 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 HSPA13P48723 471 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 FAM182AQ5T1J6 154 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PLEKHA7Q6IQ23 1121 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PHF13Q86YI8 300 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 LARGE2Q8N3Y3 721 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 FBXO27Q8NI29 283 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 MKL1Q969V6 931 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 HEXIM2Q96MH2 286 aaKnown RBP9.35□□□□□ -0.91
CSMD1-212ENST00000523387 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 DCUN1D5Q9BTE7 237 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 ANKEF1Q9NU02 776 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 SORCS3Q9UPU3 1222 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 PLIN4Q96Q06 1357 aa9.35□□□□□ -0.91
CSMD1-212ENST00000523387 DCCP43146 1447 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ARHGEF37A1IGU5 675 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 TMEM191CA6NGB0 347 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 DGAT1O75907 488 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 RALBP11234 206 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PDGFRAP16234 1089 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PKNOX1P55347 436 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 XIAPP98170 497 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 TBC1D25Q3MII6 688 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 FOXB2Q5VYV0 432 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms