RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 LURAP1LQ8IV03 231 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 C10orf53Q8N6V4 93 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 POGLUT1Q8NBL1 392 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 OR6J1Q8NGC5 347 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CALML6Q8TD86 181 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 RMDN1Q96DB5 314 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 HEXIM2Q96MH2 286 aaKnown RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 LBHD1Q9BQE6 289 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 FUT8Q9BYC5 575 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TTYH1Q9H313 450 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 RMI1Q9H9A7 625 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 C1GALT1Q9NS00 363 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 KCTD5Q9NXV2 234 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 GALNT8Q9NY28 637 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 KCMF1Q9P0J7 381 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CAPN11Q9UMQ6 739 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CNTN6Q9UQ52 1028 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PCDHB4Q9Y5E5 795 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TCRBV5S2A0A599 114 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 URADA6NGE7 173 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 LIPT2A6NK58 231 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SAC3D1A6NKF1 404 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TMEM110-MUSTN1A8MSY1 372 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 J3KTA2 159 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PEX12O00623 359 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ASAP2O43150 1006 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PRAMEF4O60810 478 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CUTAO60888 179 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 COQ9O75208 318 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 GUCY1B2O75343 617 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PDE8BO95263 885 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FTCDO95954 541 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 GLI1P08151 1106 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SPARCP09486 303 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FURINP09958 794 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 KRT13P13646 458 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 RPS2P15880 293 aaKnown RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 TFEBP19484 476 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FUT4P22083 530 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PCSK1P29120 753 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PPARGP37231 505 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 GATA4P43694 442 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TNNT2P45379 298 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 CAPZA2P47755 286 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SLC6A11P48066 632 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CPT1AP50416 773 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 HDAC4P56524 1084 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CTXN1P60606 82 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 POU6F2P78424 691 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 YWHAHQ04917 246 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 CD69Q07108 199 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 MTM1Q13496 603 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CAMK2DQ13557 499 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 GAB4Q2WGN9 574 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ZNF628Q5EBL2 1059 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 KRBOX4Q5JUW0 171 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FCRL6Q6DN72 434 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 IRGCQ6NXR0 463 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 BMP8AQ7Z5Y6 402 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FBXO11Q86XK2 927 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 POMGNT2Q8NAT1 580 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 IL17RDQ8NFM7 739 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 LINS1Q8NG48 757 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SMCR8Q8TEV9 937 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 RAPGEF4Q8WZA2 1011 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 EZH1Q92800 747 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 ATP6V0A1Q93050 837 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SLC22A18Q96BI1 424 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 C16orf45Q96MC5 204 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 NACC1Q96RE7 527 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 UHRF1Q96T88 793 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 HAPLN2Q9GZV7 340 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 MS4A7Q9GZW8 240 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 FSCN3Q9NQT6 498 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SNTG1Q9NSN8 517 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CACNG4Q9UBN1 327 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 A4D1N5 150 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 OR2W5A6NFC9 320 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 EFCAB8A8MWE9 144 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 NUDT19A8MXV4 375 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 H0Y858 1186 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 H7C4K7 107 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 PRPSAP2O60256 369 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 EXOC3O60645 756 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 ALX3O95076 343 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 LY86O95711 162 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 GRPP07492 148 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 FAM87AP0C7U9 286 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 CYP2A6P11509 494 aaPredicted RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 FAHP16930 419 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 TPH1P17752 444 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 FPR1P21462 350 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 RPL10P27635 214 aaKnown RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 RFC1P35251 1148 aaPredicted RBP4.31□□□□□ -1.72
SKP1-209ENST00000522552 TKTL1P51854 596 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 KCNAB1Q14722 419 aa4.31□□□□□ -1.72
SKP1-209ENST00000522552 RAB41Q5JT25 222 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms