RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ZNF513Q8N8E2 541 aaPredicted RBP15.78■□□□□ 0.12
PRKDC-204ENST00000521331 SCAMP5Q8TAC9 235 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 KCNK16Q96T55 309 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 NACA2Q9H009 215 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 SLC32A1Q9H598 525 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 SMYD3Q9H7B4 428 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 SPHK2Q9NRA0 654 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
PRKDC-204ENST00000521331 WASF3Q9UPY6 502 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 LAMA1P25391 3075 aa15.78■□□□□ 0.12
PRKDC-204ENST00000521331 FAM208BQ5VWN6 2430 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 PTPRDP23468 1912 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 PVALEFA0A1B0GWK0 134 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 FAM92AA1XBS5 289 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 C1QTNF9BB2RNN3 333 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 AP5Z1O43299 807 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 TULP3O75386 442 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 CLSTN1O94985 981 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 C1QTNF9P0C862 333 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 P4HA1P13674 534 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 PTGER3P43115 390 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 KNOP1Q1ED39 458 aaKnown RBP15.77■□□□□ 0.12
PRKDC-204ENST00000521331 PEAR1Q5VY43 1037 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-204ENST00000521331 SLC23A3Q6PIS1 610 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 SHC4Q6S5L8 630 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 SLC36A4Q6YBV0 504 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 BBS7Q8IWZ6 715 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 TERB1Q8NA31 727 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 KDF1Q8NAX2 398 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-204ENST00000521331 DEFB124Q8NES8 71 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 CEP76Q8TAP6 659 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 ADAM33Q9BZ11 813 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 CCSER2Q9H7U1 834 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 GMIPQ9P107 970 aa15.77■□□□□ 0.12
PRKDC-204ENST00000521331 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
PRKDC-204ENST00000521331 IGF2RP11717 2491 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 ZBTB24O43167 697 aaPredicted RBP15.76■□□□□ 0.11
PRKDC-204ENST00000521331 AP1G2O75843 785 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 ENGP17813 658 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 CDH8P55286 799 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 CLDN10P78369 228 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 NCOA4Q13772 614 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 ANO4Q32M45 955 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 C10orf76Q5T2E6 689 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 PAQR9Q6ZVX9 377 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 RABEPKQ7Z6M1 372 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 NAT16Q8N8M0 369 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 FBXO44Q9H4M3 255 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 SLC39A2Q9NP94 309 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 ZDHHC4Q9NPG8 344 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 KRT82Q9NSB4 513 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 TMEM74BQ9NUR3 256 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 PILRBQ9UKJ0 227 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 STARD13Q9Y3M8 1113 aa15.76■□□□□ 0.11
PRKDC-204ENST00000521331 THADAQ6YHU6 1953 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 UPK3BL1B0FP48 263 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 UPK3BL2E5RIL1 263 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 POLR2DO15514 142 aaKnown RBP15.75■□□□□ 0.11
PRKDC-204ENST00000521331 TLR5O60602 858 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 HOXB2P14652 356 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 ITPKAP23677 461 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 NTSR1P30989 418 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 MAPK8P45983 427 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 CASP4P49662 377 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 ATXN3P54252 364 aaPredicted RBP15.75■□□□□ 0.11
PRKDC-204ENST00000521331 RPL6Q02878 288 aaKnown RBP15.75■□□□□ 0.11
PRKDC-204ENST00000521331 DUOXA1Q1HG43 343 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 HTR3DQ70Z44 454 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 TMEM25Q86YD3 366 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 FUKQ8N0W3 1084 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 FRMD1Q8N878 549 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 SCNM1Q9BWG6 230 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 BLZF1Q9H2G9 400 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 TLR8Q9NR97 1041 aaKnown RBP15.75■□□□□ 0.11
PRKDC-204ENST00000521331 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 ZMIZ1Q9ULJ6 1067 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 SLC6A14Q9UN76 642 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 NUP205Q92621 2012 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 FRYQ5TBA9 3013 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 CACNA1GO43497 2377 aa15.75■□□□□ 0.11
PRKDC-204ENST00000521331 ATXN2Q99700 1313 aaKnown RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 K7ELQ4 463 aaPredicted RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 ZNF217O75362 1048 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 C4BPAP04003 597 aaKnown RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 CFIP05156 583 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 IRF1P10914 325 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 GABRG2P18507 467 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 TRIM21P19474 475 aaKnown RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 SPINK2P20155 84 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 GFPT1Q06210 699 aaPredicted RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 GOLGA8FQ08AF8 430 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 GOLGA8DPQ0D2H9 430 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 GRAMD4Q6IC98 578 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 SDE2Q6IQ49 451 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms