RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 GPATCH3Q96I76 525 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 UHRF1Q96T88 793 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-216ENST00000520868 MNTQ99583 582 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 PDCD2LQ9BRP1 358 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 NACAP1Q9BZK3 213 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 NAPBQ9H115 298 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 TMX1Q9H3N1 280 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 EVLQ9UI08 416 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-216ENST00000520868 STX8Q9UNK0 236 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 CDY2AQ9Y6F7 541 aa6.81□□□□□ -1.32
PABPC1-216ENST00000520868 TSPY2A6NKD2 308 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 NMT2O60551 498 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 ADH4P08319 380 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 MYL3P08590 195 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 LTA4HP09960 611 aaKnown RBP6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CYP2C9P11712 490 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CASRP41180 1078 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 TRIM25Q14258 630 aaKnown RBP6.8□□□□□ -1.32
PABPC1-216ENST00000520868 PITRM1Q5JRX3 1037 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 FNDC7Q5VTL7 733 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 NAIF1Q69YI7 327 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-216ENST00000520868 DEFB128Q7Z7B8 93 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 LYSMD2Q8IV50 215 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 SLC41A1Q8IVJ1 513 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 AMER2Q8N7J2 671 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 RAX2Q96IS3 184 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 KCTD10Q9H3F6 313 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 DCTPP1Q9H773 170 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 TRMT13Q9NUP7 481 aaKnown RBP6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CYP39A1Q9NYL5 469 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CCPG1Q9ULG6 757 aa6.8□□□□□ -1.32
PABPC1-216ENST00000520868 CHD9Q3L8U1 2897 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 RANBP6O60518 1105 aaKnown RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 PLA2G6O60733 806 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 PRAMEF4O60810 478 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 STC2O76061 302 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 SLC16A2P36021 539 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 ID4P47928 161 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 GZMKP49863 264 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 TFF2Q03403 129 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 FAPQ12884 760 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 MRPL49Q13405 166 aaKnown RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 BAATQ14032 418 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 FHL2Q14192 279 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 UGT8Q16880 541 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 CCDC96Q2M329 555 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 UBR7Q8N806 425 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 OTUD7AQ8TE49 926 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 CPPED1Q9BRF8 314 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 FSD1Q9BTV5 496 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 SEZ6LQ9BYH1 1024 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 WDR11Q9BZH6 1224 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 ALDH8A1Q9H2A2 487 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 IL17RBQ9NRM6 502 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 TOPORSQ9NS56 1045 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 REXO2Q9Y3B8 237 aaKnown RBP6.79□□□□□ -1.32
PABPC1-216ENST00000520868 Q9Y3F1 56 aa6.79□□□□□ -1.32
PABPC1-216ENST00000520868 MCM3APO60318 1980 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 TNKSO95271 1327 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 NCOR1O75376 2440 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 GREB1LQ9C091 1923 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 ERC2O15083 957 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 CA3P07451 260 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 SUPT20HL2P0C7V6 817 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 ENPP1P22413 925 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 CALML3P27482 149 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 MASP1P48740 699 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 ALDH5A1P51649 535 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 LGALS4P56470 323 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 PDCD1Q15116 288 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 DUSP28Q4G0W2 176 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 CT83Q5H943 113 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 RABL3Q5HYI8 236 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 RRP12Q5JTH9 1297 aaKnown RBP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 DOK3Q7L591 496 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 OR6J1Q8NGC5 347 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 MTG1Q9BT17 334 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 FTOQ9C0B1 505 aaKnown RBP eCLIP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 ADD3Q9UEY8 706 aaKnown RBP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 CLCA2Q9UQC9 943 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
PABPC1-216ENST00000520868 CHD7Q9P2D1 2997 aa6.78□□□□□ -1.32
PABPC1-216ENST00000520868 FRMPD2Q68DX3 1309 aaPredicted RBP6.77□□□□□ -1.32
PABPC1-216ENST00000520868 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
PABPC1-216ENST00000520868 BDP1A6H8Y1 2624 aa6.77□□□□□ -1.33
PABPC1-216ENST00000520868 SUV39H1O43463 412 aa6.77□□□□□ -1.33
PABPC1-216ENST00000520868 DNAJC6O75061 913 aa6.77□□□□□ -1.33
PABPC1-216ENST00000520868 ICAM1P05362 532 aa6.77□□□□□ -1.33
PABPC1-216ENST00000520868 LPLP06858 475 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms