RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	ZNF668	Q96K58	619 aa	Predicted RBP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ADAM2	Q99965	735 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RTKN	Q9BST9	563 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GALNT9	Q9HCQ5	603 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SAYSD1	Q9NPB0	183 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SNX14	Q9Y5W7	946 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	COL15A1	P39059	1388 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	WDR33	Q9C0J8	1336 aa	Known RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RRN3P2	A6NIE6	340 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NPIPB8	E9PQR5	432 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776		J3KTA2	159 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM20B	O75063	409 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CBFA2T3	O75081	653 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TAF5L	O75529	589 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VIP	P01282	170 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HTR7	P34969	479 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PDE6C	P51160	858 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ALDH18A1	P54886	795 aa	Known RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SCAP	Q12770	1279 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CUL4B	Q13620	913 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM110C	Q1W6H9	321 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TRIM60	Q495X7	471 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PREPL	Q4J6C6	727 aa	Predicted RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	JAKMIP3	Q5VZ66	844 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TEX19	Q8NA77	164 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	IL17D	Q8TAD2	202 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ATG4A	Q8WYN0	398 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RUBCN	Q92622	972 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	USP13	Q92995	863 aa	Predicted RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GRAMD1A	Q96CP6	724 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	WDR24	Q96S15	920 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	C17orf80	Q9BSJ5	609 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	INTS13	Q9NVM9	706 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PARPBP	Q9NWS1	579 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FEM1B	Q9UK73	627 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NOX1	Q9Y5S8	564 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A18P	A6NE21	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A16P	A6NEW6	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HMX3	A6NHT5	357 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A9P	A6NNJ1	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A5P	A8MXJ8	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TISP43	B9A030	160 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PRRT4	C9JH25	899 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PPM1D	O15297	605 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ZSCAN9	O15535	394 aa	Predicted RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NDUFA10	O95299	355 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PDHA1	P08559	390 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A15P	P0C7V4	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM90A14P	P0C7W9	464 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PRKAA2	P54646	552 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TIRAP	P58753	221 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC25A3	Q00325	362 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	KLF10	Q13118	480 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	EFR3A	Q14156	821 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SPDYE7P	Q495Y7	208 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DEPDC1	Q5TB30	811 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	IZUMO1	Q8IYV9	350 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NRSN1	Q8IZ57	195 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CPEB3	Q8NE35	698 aa	Known RBP	4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC30A5	Q8TAD4	765 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ASB12	Q8WXK4	309 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HAPLN3	Q96S86	360 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NUDT22	Q9BRQ3	303 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DAPP1	Q9UN19	280 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	USP22	Q9UPT9	525 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC27A6	Q9Y2P4	619 aa		4.11	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PNMA6E	A0A0J9YXQ4	647 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NARS	O43776	548 aa	Known RBP	4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	EPHA3	P29320	983 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	BMPR1A	P36894	532 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DPT	Q07507	201 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TUBA3C	Q13748	450 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FHL2	Q14192	279 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TAF12	Q16514	161 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC9A4	Q6AI14	798 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RINT1	Q6NUQ1	792 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TUBA3E	Q6PEY2	450 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CLEC9A	Q6UXN8	241 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DTX2	Q86UW9	622 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CPO	Q8IVL8	374 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	COLGALT2	Q8IYK4	626 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	METTL25	Q8N6Q8	603 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CSGALNACT1	Q8TDX6	532 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	OSCP1	Q8WVF1	389 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ATRIP	Q8WXE1	791 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	MPP4	Q96JB8	637 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PLEKHG4B	Q96PX9	1271 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ACTRT3	Q9BYD9	372 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TWSG1	Q9GZX9	223 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VPS16	Q9H269	839 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RIC8A	Q9NPQ8	531 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CEP72	Q9P209	647 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RIMKLB	Q9ULI2	386 aa		4.1	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TMEM200C	A6NKL6	621 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776		H0Y3Z8	333 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CDKL5	O76039	1030 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VNN1	O95497	513 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms