RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CCDC142Q17RM4 750 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 ERMARDQ5T6L9 678 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 RNASEH2BQ5TBB1 312 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 FAM43BQ6ZT52 329 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 BZW1Q7L1Q6 419 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 CENPIQ92674 756 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 HNRNPABQ99729 332 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 ZNF670Q9BS34 389 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 PAK6Q9NQU5 681 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 RCOR3Q9P2K3 495 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 TUBGCP4Q9UGJ1 667 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 RSPH14Q9UHP6 348 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 SLC24A2Q9UI40 661 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 IPPQ9Y573 584 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 RALGAPA2Q2PPJ7 1873 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 XPO1O14980 1071 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 GPR182O15218 404 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 ATP2A2P16615 1042 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 CHKAP35790 457 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 NR2C2P49116 596 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 SLC18A1P54219 525 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 EIF3EP60228 445 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 ORC1Q13415 861 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 XRCC4Q13426 336 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 KRT81Q14533 505 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 NOMO1Q15155 1222 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 LLGL1Q15334 1064 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 KYNUQ16719 465 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 CCDC14Q49A88 953 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 PMF1Q6P1K2 205 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 STRADAQ7RTN6 431 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 TTC30AQ86WT1 665 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 C10orf67Q8IYJ2 551 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 EMC1Q8N766 993 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 MYCBPAPQ8TBZ2 947 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 KCTD13Q8WZ19 329 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 C18orf25Q96B23 403 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 RTP4Q96DX8 246 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 ASB2Q96Q27 587 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 XPO6Q96QU8 1125 aaKnown RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 KLHL11Q9NVR0 708 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 PCSK1NQ9UHG2 260 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 GIT1Q9Y2X7 761 aa10.39□□□□□ -0.75
SPARC-202ENST00000520687 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
SPARC-202ENST00000520687 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 C5orf60A6NFR6 353 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 SPAG6O75602 509 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 FBXO21O94952 628 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 ACSL3O95573 720 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 SKIP12755 728 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 CCT5P48643 541 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 LHX1P48742 406 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 VPS41P49754 854 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 RAB27AP51159 221 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 CDH6P55285 790 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 LILRA4P59901 499 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 ROR1Q01973 937 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 PDE4CQ08493 712 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 ZC3H12AQ5D1E8 599 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 TWF2Q6IBS0 349 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 TADA2BQ86TJ2 420 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 C12orf29Q8N999 325 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 ZNF473Q8WTR7 871 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 KBTBD7Q8WVZ9 684 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 HSPH1Q92598 858 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 PRCCQ92733 491 aaPredicted RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 FAF2Q96CS3 445 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 CHMP6Q96FZ7 201 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 DDX23Q9BUQ8 820 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 CALN1Q9BXU9 219 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPARC-202ENST00000520687 INTS9Q9NV88 658 aaKnown RBP10.38□□□□□ -0.75
SPARC-202ENST00000520687 PAK5Q9P286 719 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 TJP2Q9UDY2 1190 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 GTF2IRD1Q9UHL9 959 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 SQORQ9Y6N5 450 aa10.38□□□□□ -0.75
SPARC-202ENST00000520687 BCLAF3A2AJT9 711 aaKnown RBP10.37□□□□□ -0.75
SPARC-202ENST00000520687 E7ESA3 106 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 APOL1O14791 398 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 PAPSS1O43252 624 aaPredicted RBP10.37□□□□□ -0.75
SPARC-202ENST00000520687 KIAA0754O94854 1291 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 RBP3P10745 1247 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 CYBAP13498 195 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
SPARC-202ENST00000520687 AKAP5P24588 427 aa10.37□□□□□ -0.75
SPARC-202ENST00000520687 ZNF135P52742 658 aaPredicted RBP10.37□□□□□ -0.75
SPARC-202ENST00000520687 AIF1P55008 147 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms