RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 TELO2Q9Y4R8 837 aa9.04□□□□□ -0.96
CTNNA1-223ENST00000520520 PCDHB4Q9Y5E5 795 aa9.04□□□□□ -0.96
CTNNA1-223ENST00000520520 NCOR1O75376 2440 aa9.04□□□□□ -0.96
CTNNA1-223ENST00000520520 NLRC5Q86WI3 1866 aa9.04□□□□□ -0.96
CTNNA1-223ENST00000520520 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 MAP3K7O43318 606 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 LIASO43766 372 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 UNC5CO95185 931 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PIGRP01833 764 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 HLA-DRAP01903 254 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TNNI1P19237 187 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 IVDP26440 423 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 NOMO3P69849 1222 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 MYO1EQ12965 1108 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PIGHQ14442 188 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PDK4Q16654 411 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TSNAXIP1Q2TAA8 658 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TIGD5Q53EQ6 642 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PLEKHG4Q58EX7 1191 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PLA2G4FQ68DD2 849 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PLEKHA7Q6IQ23 1121 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 MIS18BP1Q6P0N0 1132 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TRABD2AQ86V40 505 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 FAM228AQ86W67 206 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TEX9Q8N6V9 391 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 ATP11CQ8NB49 1132 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 RBBP8NLQ8NC74 664 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 DEPTORQ8TB45 409 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 ATG4AQ8WYN0 398 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TBC1D31Q96DN5 1066 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 C11orf70Q9BRQ4 267 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 ZNF518BQ9C0D4 1074 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 POLR3FQ9H1D9 316 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 TRABDQ9H4I3 376 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 LRRC4CQ9HCJ2 640 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 NAALADL1Q9UQQ1 740 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 ZNF148Q9UQR1 794 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 PPME1Q9Y570 386 aa9.03□□□□□ -0.96
CTNNA1-223ENST00000520520 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 PRR33A8MZF0 331 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 H3BNC9 293 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ABLIM1O14639 778 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TM9SF1O15321 606 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 SPAG6O75602 509 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ITGAVP06756 1048 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 KRT7P08729 469 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TAC1P20366 129 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 KLRC2P26717 231 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 MARK3P27448 753 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ADSSP30520 456 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 GJC1P36383 396 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 NAMPTP43490 491 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 VPS41P49754 854 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ARSEP51690 589 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 VCPP55072 806 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ARL4CP56559 192 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 IGBP1P78318 339 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 MRPS9P82933 396 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 HTRA4P83105 476 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 PPARDQ03181 441 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 UGCGQ16739 394 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 XKR3Q5GH77 459 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 WASHC2DQ5SRD0 308 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TLDC1Q6P9B6 456 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ASRGL1Q7L266 308 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 POLNQ7Z5Q5 900 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ANKS1BQ7Z6G8 1248 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 LMNTD2Q8IXW0 634 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ARHGAP24Q8N264 748 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 FIBCD1Q8N539 461 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ALLCQ8N6M5 410 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 NIPA2Q8N8Q9 360 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TMEM35BQ8NCS4 154 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 NKD2Q969F2 451 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TOP1MTQ969P6 601 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 PAIP2Q9BPZ3 127 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 NSUN3Q9H649 340 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 VPS37BQ9H9H4 285 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 SAR1AQ9NR31 198 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 EURLQ9NYK6 297 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 ARHGAP28Q9P2N2 729 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 AGO2Q9UKV8 859 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 CNTN6Q9UQ52 1028 aa9.02□□□□□ -0.97
CTNNA1-223ENST00000520520 USTQ9Y2C2 406 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms