RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 TLR2O60603 784 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CDH16O75309 829 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 MFN2O95140 757 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CDH3P22223 829 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 GPR1P46091 355 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CUL2Q13617 745 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 EFHC1Q5JVL4 640 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PRAMEF18Q5VWM3 479 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 SLC7A14Q8TBB6 771 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 MED24O75448 989 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP11B2P19099 503 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 COILP38432 576 aaPredicted RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 UGP2Q16851 508 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 ALG6Q9Y672 507 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 PSTPIP1O43586 416 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP2C9P11712 490 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 PON1P27169 355 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CAP2P40123 477 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 PNPLA4P41247 253 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RAB15P59190 212 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 USP4Q13107 963 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP4A22Q5TCH4 519 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 TPCN2Q8NHX9 752 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 HPDLQ96IR7 371 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 DYRK3O43781 588 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 GRAP2O75791 330 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 ENO1P06733 434 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 MAGEA4P43358 317 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RAB27AP51159 221 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 YWHAZP63104 245 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 PTPRN2Q92932 1015 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 OSBPL6Q9BZF3 934 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 SPACA6W5XKT8 324 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CCL15-CCL14A0A0B4J2E2 113 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CCDC130P13994 396 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 AKR1D1P51857 326 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 MTFR1Q15390 333 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 CCL15Q16663 113 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 SAMD3Q8N6K7 520 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 ERP27Q96DN0 273 aa12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM47DPA6NHR8 397 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 TSC22D2O75157 780 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 HMBSP08397 361 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 FGFR2P21802 821 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 AKT1P31749 480 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 COX10Q12887 443 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 TRIM32Q13049 653 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 STN1Q9H668 368 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PCMTD2Q9NV79 361 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 KLRC1P26715 233 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 SREBF1P36956 1147 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 RIN3Q8TB24 985 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM118BQ9BPY3 351 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 EHD4Q9H223 541 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 NOL6Q9H6R4 1146 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 C17orf102A2RUQ5 167 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ITGB3P05106 788 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 MYL2P10916 166 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PCSK1P29120 753 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ELF3P78545 371 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 USP10Q14694 798 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 AASDHQ4L235 1098 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 WLSQ5T9L3 541 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms