RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 THG1LQ9NWX6 298 aaKnown RBP23.75■■□□□ 1.39
SKP1-206ENST00000519321 NAGPAQ9UK23 515 aa23.75■■□□□ 1.39
SKP1-206ENST00000519321 SART1O43290 800 aaKnown RBP23.74■■□□□ 1.39
SKP1-206ENST00000519321 TLR5O60602 858 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 PRAMEF12O95522 483 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 TCF3P15923 654 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 PFKPQ01813 784 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 KLHDC10Q6PID8 442 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 NOP9Q86U38 636 aaKnown RBP23.74■■□□□ 1.39
SKP1-206ENST00000519321 DDX42Q86XP3 938 aaKnown RBP eCLIP23.74■■□□□ 1.39
SKP1-206ENST00000519321 ST13P5Q8NFI4 369 aaPredicted RBP23.74■■□□□ 1.39
SKP1-206ENST00000519321 BPIFB1Q8TDL5 484 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 DDX1Q92499 740 aaKnown RBP23.74■■□□□ 1.39
SKP1-206ENST00000519321 SLC22A12Q96S37 553 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 PLA2G2FQ9BZM2 168 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 SLC2A4RGQ9NR83 387 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.74■■□□□ 1.39
SKP1-206ENST00000519321 TTC28Q96AY4 2481 aa23.74■■□□□ 1.39
SKP1-206ENST00000519321 COCHO43405 550 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 LSM8O95777 96 aaKnown RBP23.73■■□□□ 1.39
SKP1-206ENST00000519321 CFHP08603 1231 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 MBL2P11226 248 aaPredicted RBP23.73■■□□□ 1.39
SKP1-206ENST00000519321 RARGP13631 454 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 ATP5C1P36542 298 aaKnown RBP23.73■■□□□ 1.39
SKP1-206ENST00000519321 DAOAP59103 153 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 YWHAGP61981 247 aaKnown RBP eCLIP23.73■■□□□ 1.39
SKP1-206ENST00000519321 CDR2Q01850 454 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 FCHO2Q0JRZ9 810 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 PDCLQ13371 301 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 ARHGAP29Q52LW3 1261 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 SCD5Q86SK9 330 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 TMEM110Q86TL2 294 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 PASD1Q8IV76 773 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 KIAA1958Q8N8K9 716 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 BAP1Q92560 729 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 GOLGA1Q92805 767 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 TTYH3Q9C0H2 523 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 RNF38Q9H0F5 515 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 SMG9Q9H0W8 520 aaKnown RBP23.73■■□□□ 1.39
SKP1-206ENST00000519321 NUCKS1Q9H1E3 243 aaKnown RBP23.73■■□□□ 1.39
SKP1-206ENST00000519321 CCSER2Q9H7U1 834 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 NMUR1Q9HB89 426 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 ITIH6Q6UXX5 1313 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 VCANP13611 3396 aa23.73■■□□□ 1.39
SKP1-206ENST00000519321 A0A1W2PQJ5 194 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 ZNF263O14978 683 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 CDH5P33151 784 aaPredicted RBP23.72■■□□□ 1.39
SKP1-206ENST00000519321 PLCB2Q00722 1185 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 TAF3Q5VWG9 929 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 BTBD8Q5XKL5 378 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 TRIM72Q6ZMU5 477 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 GPIHBP1Q8IV16 184 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 ZNF397Q8NF99 534 aaPredicted RBP23.72■■□□□ 1.39
SKP1-206ENST00000519321 IPO4Q8TEX9 1081 aaKnown RBP23.72■■□□□ 1.39
SKP1-206ENST00000519321 KHSRPQ92945 711 aaKnown RBP eCLIP23.72■■□□□ 1.392e-7■■■□□ 16.3
SKP1-206ENST00000519321 IRF7Q92985 503 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 RSPRY1Q96DX4 576 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 PPP1R13BQ96KQ4 1090 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 BRD9Q9H8M2 597 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 ABCC13Q9NSE7 274 aa23.72■■□□□ 1.39
SKP1-206ENST00000519321 NOCTQ9UK39 431 aaKnown RBP23.72■■□□□ 1.39
SKP1-206ENST00000519321 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.72■■□□□ 1.391e-16■■□□□ 11.8
SKP1-206ENST00000519321 CHADO15335 359 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 ARID5AQ03989 594 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 SIGLEC14Q08ET2 396 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 GRM2Q14416 872 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 CC2D1AQ6P1N0 951 aaPredicted RBP23.71■■□□□ 1.39
SKP1-206ENST00000519321 SARM1Q6SZW1 724 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 WDTC1Q8N5D0 677 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 MSANTD4Q8NCY6 345 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 C1orf131Q8NDD1 294 aaKnown RBP23.71■■□□□ 1.39
SKP1-206ENST00000519321 DNASE1L2Q92874 299 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 TRIM62Q9BVG3 475 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 MIS12Q9H081 205 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 OLA1Q9NTK5 396 aaKnown RBP23.71■■□□□ 1.39
SKP1-206ENST00000519321 OSER1Q9NX31 292 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 CYTH4Q9UIA0 394 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 DNMT3LQ9UJW3 386 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 CCL26Q9Y258 94 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 CPQQ9Y646 472 aa23.71■■□□□ 1.39
SKP1-206ENST00000519321 LRRC53A6NM62 1247 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 PIK3R2O00459 728 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 NARSO43776 548 aaKnown RBP23.7■■□□□ 1.38
SKP1-206ENST00000519321 GABBR2O75899 941 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 MMEP08473 750 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 GDI1P31150 447 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 PGFP49763 221 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 GPC5P78333 572 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 GOLGA8FQ08AF8 430 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 GOLGA8DPQ0D2H9 430 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 USP4Q13107 963 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 ZNF77Q15935 545 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 C10orf120Q5SQS8 335 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 SFMBT2Q5VUG0 894 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 SH3RF2Q8TEC5 729 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 SYNCQ9H7C4 482 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 TRPV5Q9NQA5 729 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 AIPL1Q9NZN9 384 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 WNT16Q9UBV4 365 aa23.7■■□□□ 1.38
SKP1-206ENST00000519321 HELZP42694 1942 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms