RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ZNF513Q8N8E2 541 aaPredicted RBP20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 PDZD8Q8NEN9 1154 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 ELOVL4Q9GZR5 314 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 FSCN3Q9NQT6 498 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 DEC1Q9P2X7 70 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 ITPR1Q14643 2758 aa20.17■□□□□ 0.82
CTNNA1-213ENST00000519113 PTPRDP23468 1912 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 HELZP42694 1942 aaKnown RBP20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 ARHGAP33O14559 1287 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 ZNF217O75362 1048 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 YWHAQP27348 245 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 UBE2HP62256 183 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 RAB44Q7Z6P3 723 aaPredicted RBP20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 DEFB119Q8N690 84 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 OVCA2Q8WZ82 227 aa20.16■□□□□ 0.82
CTNNA1-213ENST00000519113 FRMD3A2A2Y4 597 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 HOXC11O43248 304 aaPredicted RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 TULP3O75386 442 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 TACC1O75410 805 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 RTN3O95197 1032 aaPredicted RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 HOXB2P14652 356 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 PTPN1P18031 435 aaKnown RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 GABRG2P18507 467 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 FAM193AP78312 1265 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 IFRD2Q12894 506 aaPredicted RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 SLC14A1Q13336 389 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 STXBP4Q6ZWJ1 553 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 PROSER1Q86XN7 944 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 WDR49Q8IV35 697 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 ETFBKMTQ8IXQ9 262 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 NUP93Q8N1F7 819 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 NAT16Q8N8M0 369 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 OR6B3Q8NGW1 331 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 MRPL45Q9BRJ2 306 aaKnown RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 KIAA1586Q9HCI6 787 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 PANK4Q9NVE7 773 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 DNAAF2Q9NVR5 837 aaKnown RBP20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 CALCOCO1Q9P1Z2 691 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 SH3BP1Q9Y3L3 701 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 PTPRJQ12913 1337 aa20.15■□□□□ 0.82
CTNNA1-213ENST00000519113 A0A1W2PQD8 194 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 TAF4O00268 1085 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 CD59P13987 128 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 NTSR1P30989 418 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 C10orf76Q5T2E6 689 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 HECTD3Q5T447 861 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 SDE2Q6IQ49 451 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 TERB1Q8NA31 727 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 FBXO32Q969P5 355 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 DUSP9Q99956 384 aaKnown RBP20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 FGFBP2Q9BYJ0 223 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 SPHK2Q9NRA0 654 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 PCDHB9Q9Y5E1 797 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 PI4KAP42356 2102 aa20.14■□□□□ 0.81
CTNNA1-213ENST00000519113 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 COCHO43405 550 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 GADD45BO75293 160 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 CACNA2D1P54289 1103 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 TRIP6Q15654 476 aaKnown RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 ANO4Q32M45 955 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 CCDC73Q6ZRK6 1079 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 CBWD2Q8IUF1 395 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 ZFRQ96KR1 1074 aaKnown RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 ZNF518BQ9C0D4 1074 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 GZF1Q9H116 711 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 FAM124BQ9H5Z6 455 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 STARD13Q9Y3M8 1113 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 SRPRBQ9Y5M8 271 aaKnown RBP20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 LAMA5O15230 3695 aa20.13■□□□□ 0.81
CTNNA1-213ENST00000519113 TNRC6BQ9UPQ9 1833 aaKnown RBP20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 IGHV1OR15-9A0A0B4J2B8 117 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 CAPNS1P04632 268 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 TUBP50607 506 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 TNNC1P63316 161 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 SYCP2LQ5T4T6 812 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 SNX30Q5VWJ9 437 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 TRIML1Q8N9V2 468 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 HSPA12BQ96MM6 686 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 B3GNT5Q9BYG0 378 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 TMEM30AQ9NV96 361 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 SUSD2Q9UGT4 822 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 CHORDC1Q9UHD1 332 aaPredicted RBP20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 CLIC4Q9Y696 253 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 PLXND1Q9Y4D7 1925 aa20.12■□□□□ 0.81
CTNNA1-213ENST00000519113 ATP8B3O60423 1300 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 A0A1W2PQF6 199 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 A8MXQ7 604 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 NDUFS2O75306 463 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 GNSP15586 552 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 TNNI1P19237 187 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 WASP42768 502 aa20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 CEBPZQ03701 1054 aaKnown RBP20.11■□□□□ 0.81
CTNNA1-213ENST00000519113 SCAPQ12770 1279 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms