RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPIDR-204ENST00000517824 RSPH14Q9UHP6 348 aa11.24□□□□□ -0.61
SPIDR-204ENST00000517824 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
SPIDR-204ENST00000517824 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
SPIDR-204ENST00000517824 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 DAB1O75553 588 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 STK10O94804 968 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 ABHD2P08910 425 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 FAM163BP0C2L3 166 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 RBP3P10745 1247 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 KLRC2P26717 231 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 IL1R2P27930 398 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PCSK1P29120 753 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 HOXC8P31273 242 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 CHKAP35790 457 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 ARL4AP40617 200 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 MAGEA4P43358 317 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PTPN9P43378 593 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 LHX1P48742 406 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SULT1E1P49888 294 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 BCAR1P56945 870 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 NR1H3Q13133 447 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 HIC1Q14526 733 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 OASLQ15646 514 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PTGISQ16647 500 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 HIF1AQ16665 826 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PPP6R3Q5H9R7 873 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 RHBDF2Q6PJF5 856 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SLC26A9Q7LBE3 791 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 TLCD1Q96CP7 247 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 DDX23Q9BUQ8 820 aaKnown RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-204ENST00000517824 EPN3Q9H201 632 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 PPCSQ9HAB8 311 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 KRT82Q9NSB4 513 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 NINJ2Q9NZG7 142 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 VCANP13611 3396 aa11.23□□□□□ -0.61
SPIDR-204ENST00000517824 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 H3BRJ5 948 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 MDM4O15151 490 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 GRIN2DO15399 1336 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 CABYRO75952 493 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 FBXO21O94952 628 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 PFKMP08237 780 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 NPR3P17342 541 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 RPL9P32969 192 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 CCT5P48643 541 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 HNRNPH2P55795 449 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 LILRA4P59901 499 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 RNASELQ05823 741 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 NOMO1Q15155 1222 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 MDH1BQ5I0G3 518 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 RNF180Q86T96 592 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 SLC35F5Q8WV83 523 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 PEBP4Q96S96 227 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 GAD1Q99259 594 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
SPIDR-204ENST00000517824 RNF19AQ9NV58 838 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms