RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 NAT16Q8N8M0 369 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 PNPLA1Q8N8W4 532 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 ELOVL4Q9GZR5 314 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 SPHK2Q9NRA0 654 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 RAXQ9Y2V3 346 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 PCDHB13Q9Y5F0 798 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 KIAA0391O15091 583 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 RTN3O95197 1032 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 CER1O95813 267 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 TNNC2P02585 160 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 YWHAQP27348 245 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 TUBP50607 506 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 KCNA1Q09470 495 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 SURF1Q15526 300 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 ANO4Q32M45 955 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 MDH1BQ5I0G3 518 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 GRAMD4Q6IC98 578 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 HS2ST1Q7LGA3 356 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 SCFD1Q8WVM8 642 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 LRIG1Q96JA1 1093 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 GABRG3Q99928 467 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 PCOLCE2Q9UKZ9 415 aa12.18□□□□□ -0.46
TRAPPC9-203ENST00000517667 MEI4A8MW99 385 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 H3BQV1 296 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 COCHO43405 550 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 TACC1O75410 805 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 GCNT3O95395 438 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 PDGFRBP09619 1106 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 GNL1P36915 607 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 WASP42768 502 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 IFRD2Q12894 506 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 SNX30Q5VWJ9 437 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 EGFLAMQ63HQ2 1017 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 MIB1Q86YT6 1006 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 BBS7Q8IWZ6 715 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 GPD1LQ8N335 351 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZSWIM2Q8NEG5 633 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 SETD7Q8WTS6 366 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 NOC3LQ8WTT2 800 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 FBXO32Q969P5 355 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 CDC6Q99741 560 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 CD248Q9HCU0 757 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 STK17AQ9UEE5 414 aa12.17□□□□□ -0.46
TRAPPC9-203ENST00000517667 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 GFRA2O00451 464 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 FLRT2O43155 660 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 CACNG3O60359 315 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 FAM163BP0C2L3 166 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 CD6P30203 668 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 SCARA3Q6AZY7 606 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 SLCO6A1Q86UG4 719 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 WDR49Q8IV35 697 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 CADM4Q8NFZ8 388 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 FAM84AQ96KN4 292 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 MRGPRX1Q96LB2 322 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 CBWD1Q9BRT8 395 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 NACA2Q9H009 215 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 CCDC39Q9UFE4 941 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 HCN2Q9UL51 889 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 KALRNO60229 2985 aa12.16□□□□□ -0.46
TRAPPC9-203ENST00000517667 PTPRJQ12913 1337 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 A0A087WV48 116 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZNF233A6NK53 670 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 NEDD8-MDP1E9PL57 170 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 PRPF6O94906 941 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 MATKP42679 507 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZNF132P52740 706 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 GOLGA8FQ08AF8 430 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 GOLGA8DPQ0D2H9 430 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 STARD3Q14849 445 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 KIAA1324Q6UXG2 1013 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms