RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 BEND2Q8NDZ0 799 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 VPS37AQ8NEZ2 397 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 NEU4Q8WWR8 484 aaPredicted RBP3.58□□□□□ -1.84
SKP1-203ENST00000517625 RMDN3Q96TC7 470 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 AGO4Q9HCK5 861 aaKnown RBP3.58□□□□□ -1.84
SKP1-203ENST00000517625 ARHGEF3Q9NR81 526 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 SNX15Q9NRS6 342 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 FOXJ2Q9P0K8 574 aa3.58□□□□□ -1.84
SKP1-203ENST00000517625 ZMYND8Q9ULU4 1186 aaPredicted RBP3.58□□□□□ -1.84
SKP1-203ENST00000517625 NPC1O15118 1278 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 RAMP2O60895 175 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 NTSR2O95665 410 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 FESP07332 822 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 NPSP0C0P6 89 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ARP10275 920 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 MYCLP12524 364 aaPredicted RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 NDUFB7P17568 137 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 WT1P19544 449 aaPredicted RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 GKP32189 559 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 GRK6P43250 576 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ITGA8P53708 1063 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 FOXI1Q12951 378 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 SPARCL1Q14515 664 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ACOX1Q15067 660 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ZRSR2Q15696 482 aaKnown RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 ARID4BQ4LE39 1312 aaPredicted RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 C4orf46Q504U0 113 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 RAP1GAP2Q684P5 730 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ERAP2Q6P179 960 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 TSHZ1Q6ZSZ6 1077 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 Q6ZWC4 215 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 USP49Q70CQ1 688 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ZNF627Q7L945 461 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 LDLRAD3Q86YD5 345 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 RASGRP3Q8IV61 690 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 VRK3Q8IV63 474 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 SFTPA1Q8IWL2 248 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 NRSN1Q8IZ57 195 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 CACNA2D3Q8IZS8 1091 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 LRRC71Q8N4P6 559 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 SIRT6Q8N6T7 355 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.57□□□□□ -1.84
SKP1-203ENST00000517625 SPATA5Q8NB90 893 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 CAGE1Q8TC20 777 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 OVCA2Q8WZ82 227 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 TFAP2BQ92481 460 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 GRAMD1AQ96CP6 724 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 R3HDM4Q96D70 268 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 VPS50Q96JG6 964 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 TIMP4Q99727 224 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 HERPUD2Q9BSE4 406 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 DPCDQ9BVM2 203 aaPredicted RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 FSD1LQ9BXM9 530 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 TP63Q9H3D4 680 aaPredicted RBP3.57□□□□□ -1.84
SKP1-203ENST00000517625 GJB4Q9NTQ9 266 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 SLC17A6Q9P2U8 582 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 SLC27A6Q9Y2P4 619 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 RIPOR2Q9Y4F9 1068 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 ENTPD2Q9Y5L3 495 aa3.57□□□□□ -1.84
SKP1-203ENST00000517625 WDR33Q9C0J8 1336 aaKnown RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 A0A087X1B8 175 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 VWC2LB2RUY7 222 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 EXOC5O00471 708 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PMPCBO75439 489 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 WDR47O94967 919 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 ITGA2BP08514 1039 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PDHA1P08559 390 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 NR2F6P10588 404 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PECAM1P16284 738 aaPredicted RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 KRT4P19013 534 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PDIA3P30101 505 aaKnown RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 HTR7P34969 479 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 SERPINF1P36955 418 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 RARRES1P49788 294 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 CDK7P50613 346 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 CLCN2P51788 898 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 CACNA2D1P54289 1103 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 ALDH18A1P54886 795 aaKnown RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 EIF4A1P60842 406 aaKnown RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 CYP1B1Q16678 543 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PFKFB4Q16877 469 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 FAM153CQ494X1 144 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 CCDC38Q502W7 563 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 TMTC4Q5T4D3 741 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 TANGO2Q6ICL3 276 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 RFX8Q6ZV50 586 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 PTCHD4Q6ZW05 846 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 GGNQ86UU5 652 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 EXOC8Q8IYI6 725 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 FSTL5Q8N475 847 aaPredicted RBP3.56□□□□□ -1.84
SKP1-203ENST00000517625 ABHD11Q8NFV4 315 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 SUN3Q8TAQ9 357 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 TRAPPC12Q8WVT3 735 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 XAGE5Q8WWM1 108 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 UROC1Q96N76 676 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 ISCA1Q9BUE6 129 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 DUSP26Q9BV47 211 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 DUSP22Q9NRW4 184 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 DLL3Q9NYJ7 618 aa3.56□□□□□ -1.84
SKP1-203ENST00000517625 AMFRQ9UKV5 643 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms