RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RPL10AP62906 217 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PPIDQ08752 370 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 MOGSQ13724 837 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 STILQ15468 1287 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF568Q3ZCX4 644 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 ATP13A4Q4VNC1 1196 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PLEKHA7Q6IQ23 1121 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 BBS12Q6ZW61 710 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 BANPQ8N9N5 519 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 AGR3Q8TD06 166 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SNRNP27Q8WVK2 155 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 TMEM143Q96AN5 459 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 ILKAPQ9H0C8 392 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 KLHL8Q9P2G9 620 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 ZMYND8Q9ULU4 1186 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 NENFQ9UMX5 172 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 TMX2Q9Y320 296 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 DDTLA6NHG4 134 aaPredicted RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 XPO1O14980 1071 aaKnown RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 ESRRBO95718 433 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 APOA4P06727 396 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 POLBP06746 335 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 FDFT1P37268 417 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 ALDH1A3P47895 512 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 NUP107P57740 925 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 ACTR2P61160 394 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 SLC25A3Q00325 362 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 OCA2Q04671 838 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 POU5F2Q8N7G0 328 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 CCNYL1Q8N7R7 359 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 KYQ8NBH2 561 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 NAT14Q8WUY8 206 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 SLC44A1Q8WWI5 657 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 FAM149B1Q96BN6 582 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 TMA16Q96EY4 203 aaKnown RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 NAT9Q9BTE0 207 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 SPATA16Q9BXB7 569 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 SNX25Q9H3E2 840 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 ST6GALNAC4Q9H4F1 302 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 EFCAB1Q9HAE3 211 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 CAPN10Q9HC96 672 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 PFDN4Q9NQP4 134 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF277Q9NRM2 450 aaPredicted RBP6.9□□□□□ -1.31
CPNE3-203ENST00000517490 CLIC5Q9NZA1 410 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 RABGEF1Q9UJ41 708 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 USP18Q9UMW8 372 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 FIS1Q9Y3D6 152 aa6.9□□□□□ -1.31
CPNE3-203ENST00000517490 SIPA1L3O60292 1781 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 RARBP10826 455 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 IL10P22301 178 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 EIF4BP23588 611 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TNFAIP2Q03169 654 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 OASLQ15646 514 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CNPY1Q3B7I2 92 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 WDR72Q3MJ13 1102 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TCHHL1Q5QJ38 904 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 FAXCQ5TGI0 409 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 JADE1Q6IE81 842 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 MON1BQ7L1V2 547 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CROCCP3Q8IVE0 287 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM161BQ8NDZ6 487 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ELMO3Q96BJ8 720 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GPRASP2Q96D09 838 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 AGBL1Q96MI9 1066 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TARS2Q9BW92 718 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CAAP1Q9H8G2 361 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 DDX18Q9NVP1 670 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GTSE1Q9NYZ3 720 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 C6orf203Q9P0P8 240 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TTLL3Q9Y4R7 772 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CLUHO75153 1309 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CALCAP01258 141 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 KDELR1P24390 212 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 PMLP29590 882 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ACAP1Q15027 740 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 SLC5A9Q2M3M2 681 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 N4BP2L1Q5TBK1 243 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF354CQ86Y25 554 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CCDC138Q96M89 665 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GCNAQ96QF7 691 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 AAASQ9NRG9 546 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CISHQ9NSE2 258 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 C20orf96Q9NUD7 363 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 SLIT2O94813 1529 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TJP1Q07157 1748 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TCRBV9S1A1TA0A576 114 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CPA3P15088 417 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TGM2P21980 687 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 KLRC2P26717 231 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 RTP1P59025 263 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms