RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 CCDC38Q502W7 563 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 TMC7Q7Z402 723 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 TFAP2DQ7Z6R9 452 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 CCDC185Q8N715 623 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 CXorf38Q8TB03 319 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 GOLGA6L10A6NI86 522 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 KCNK1O00180 336 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 TJP3O95049 919 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 PFKMP08237 780 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 RAB27AP51159 221 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 GRIK3Q13003 919 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 P3H1Q32P28 736 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 BBS9Q3SYG4 887 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 CCDC14Q49A88 953 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 TRNP1Q6NT89 227 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 ALKAL1Q6UXT8 129 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 KRT222Q8N1A0 295 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 SMOQ99835 787 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 MLXIPLQ9NP71 852 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 ANAPC5Q9UJX4 755 aa10.19□□□□□ -0.78
EFCAB13-203ENST00000517484 KCNN4O15554 427 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ENDOD1O94919 500 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 GOT1P17174 413 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ITGB8P26012 769 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ELF1P32519 619 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ARL4AP40617 200 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ITKQ08881 620 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 PTP4A2Q12974 167 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 KRT71Q3SY84 523 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 BEND6Q5SZJ8 279 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 C11orf63Q6NUN7 778 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ZNF771Q7L3S4 317 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 FMO2Q99518 471 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 PAIP2Q9BPZ3 127 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 SNRNP25Q9BV90 132 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 DUSP16Q9BY84 665 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 VPS37BQ9H9H4 285 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 MAD1L1Q9Y6D9 718 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 POC1B-GALNT4F8VUJ3 575 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 HGSO14964 777 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 SLC4A1P02730 911 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 H2AFXP16104 143 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 PECAM1P16284 738 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 GJA1P17302 382 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 EPHB2P29323 1055 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 BYSLQ13895 437 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ZNF268Q14587 947 aaPredicted RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 C10orf120Q5SQS8 335 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 SLFN11Q7Z7L1 901 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 TP53INP2Q8IXH6 220 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 MGARPQ8TDB4 240 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 SLC35F5Q8WV83 523 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 PEBP4Q96S96 227 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 APOL2Q9BQE5 337 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ZMYND15Q9H091 742 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 ALG13Q9NP73 1137 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
EFCAB13-203ENST00000517484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 MCF2LO15068 1137 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 GABBR2O75899 941 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ZBED1O96006 694 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 KRT7P08729 469 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 SLC1A1P43005 524 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 RPL21P46778 160 aaKnown RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 PGFP49763 221 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 SNX16P57768 344 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 MGAT3Q09327 533 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 DCLRE1AQ6PJP8 1040 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ARFGAP1Q8N6T3 406 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ACTRT1Q8TDG2 376 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 PPANQ9NQ55 473 aaKnown RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 AVENQ9NQS1 362 aaPredicted RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 DFFAO00273 331 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ADAM12O43184 909 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 SP100P23497 879 aaPredicted RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 KYNUQ16719 465 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 ZNF662Q6ZS27 426 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 RBM41Q96IZ5 413 aaKnown RBP10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 COLEC11Q9BWP8 271 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 RAB17Q9H0T7 212 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 WDR35Q9P2L0 1181 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 RNF14Q9UBS8 474 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 PHF2O75151 1096 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 PRLRP16471 622 aa10.17□□□□□ -0.78
EFCAB13-203ENST00000517484 TFDP3Q5H9I0 405 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms