RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 HIST1H2ADP20671 130 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF200P98182 395 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF177Q13360 481 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ARMC6Q6NXE6 501 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANGPTL8Q6UXH0 198 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 LRRC74BQ6ZQY2 392 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 MSL3Q8N5Y2 521 aaKnown RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 HIST1H2AHQ96KK5 128 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 HIST1H2AJQ99878 128 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 TINF2Q9BSI4 451 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 H2AFJQ9BTM1 129 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 FTHL17Q9BXU8 183 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 VPS9D1Q9Y2B5 631 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 GAKO14976 1311 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 TAF4O00268 1085 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CKMP06732 381 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 SNRPAP09012 282 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 GEMIN4P57678 1058 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDH18Q13634 790 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDH24Q86UP0 819 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 RNPEPL1Q9HAU8 725 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CLCN3P51790 818 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 POLD3Q15054 466 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 AGO4Q9HCK5 861 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 MPP6Q9NZW5 540 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDV3Q9UKY7 258 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 MYMKA6NI61 221 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CYP26A1O43174 497 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 S100A1P23297 94 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 GRK2P25098 689 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 GJA8P48165 433 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 MTFR1Q15390 333 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 TNIP2Q8NFZ5 429 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 EGFL8Q99944 293 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 COPG2Q9UBF2 871 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CBFA2T3O75081 653 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 SYTL3Q4VX76 610 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 FASTKD1Q53R41 847 aaKnown RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 BOLA3Q53S33 107 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 ARMCX4Q5H9R4 360 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 LMBRD2Q68DH5 695 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
PCDHGA6-201ENST00000517434 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 SMIM31A0A1B0GVY4 71 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ABLIM1O14639 778 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZW10O43264 779 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZBTB48P10074 688 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 VDRP11473 427 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 PTK7Q13308 1070 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 STARD3Q14849 445 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 KIZQ2M2Z5 673 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 CES5AQ6NT32 575 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 LRRC6Q86X45 466 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 IL25Q9H293 177 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 PXDNQ92626 1479 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 C1orf232A0A0U1RR37 186 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 LIN7AO14910 233 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 RARGP13631 454 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 INSRRP14616 1297 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 PGM5Q15124 567 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 OOSP2Q86WS3 158 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 SLC35G2Q8TBE7 412 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 LRRC39Q96DD0 335 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF446Q9NWS9 450 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 IMPG1Q17R60 797 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 HERC6Q8IVU3 1022 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 AGAP11Q8TF27 550 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 RRN3Q9NYV6 651 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 GRID1Q9ULK0 1009 aa12.65□□□□□ -0.38
PCDHGA6-201ENST00000517434 EIF2S1P05198 315 aaKnown RBP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 FOXD4Q12950 439 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms