RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TERB1Q8NA31 727 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 B3GALNT2Q8NCR0 500 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 B3GNT5Q9BYG0 378 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 DPEP3Q9H4B8 488 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 SPHK2Q9NRA0 654 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 CHORDC1Q9UHD1 332 aaPredicted RBP16.73■□□□□ 0.27
LMNA-223ENST00000515459 PKD1L2Q7Z442 2459 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 ZFYVE26Q68DK2 2539 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 CACNA1EQ15878 2313 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 FAM221BA6H8Z2 402 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 CLDN5O00501 218 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 ARHGAP33O14559 1287 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 NTSR1P30989 418 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
LMNA-223ENST00000515459 HNRNPDQ14103 355 aaKnown RBP16.72■□□□□ 0.27
LMNA-223ENST00000515459 ACAP1Q15027 740 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 SNRNP35Q16560 246 aaKnown RBP16.72■□□□□ 0.27
LMNA-223ENST00000515459 BBS7Q8IWZ6 715 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 MINDY1Q8N5J2 469 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 KCNK16Q96T55 309 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 CGRRF1Q99675 332 aa16.72■□□□□ 0.27
LMNA-223ENST00000515459 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
LMNA-223ENST00000515459 ATP8B3O60423 1300 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 A0A087X0B3 334 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 IGHV1OR15-9A0A0B4J2B8 117 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 ZNF217O75362 1048 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 SYPP08247 313 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 PDCP20941 246 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 HOXD13P35453 343 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 WASP42768 502 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 TUBP50607 506 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 FAM193AP78312 1265 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 TRPC3Q13507 836 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 ZNF423Q2M1K9 1284 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 SNX30Q5VWJ9 437 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 CHCHD4Q8N4Q1 142 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 PDILTQ8N807 584 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 CCDC127Q96BQ5 260 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
LMNA-223ENST00000515459 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.27
LMNA-223ENST00000515459 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 A0A1W2PQF6 199 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMNA-223ENST00000515459 STAU1O95793 577 aaKnown RBP16.7■□□□□ 0.26
LMNA-223ENST00000515459 CD59P13987 128 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 PSMD6Q15008 389 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 SDE2Q6IQ49 451 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 TMEM25Q86YD3 366 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 SLC41A1Q8IVJ1 513 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 CHPFQ8IZ52 775 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 SCAMP5Q8TAC9 235 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 HSPA12BQ96MM6 686 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 NACA2Q9H009 215 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 DNAAF2Q9NVR5 837 aaKnown RBP16.7■□□□□ 0.26
LMNA-223ENST00000515459 IL37Q9NZH6 218 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 HCN2Q9UL51 889 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 CYP8B1Q9UNU6 501 aa16.7■□□□□ 0.26
LMNA-223ENST00000515459 TRIM24O15164 1050 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 IRF1P10914 325 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 ATICP31939 592 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 SLC5A3P53794 718 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 MYL6P60660 151 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 SLC14A1Q13336 389 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 EGFLAMQ63HQ2 1017 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 GRAMD4Q6IC98 578 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 FAM35AQ86V20 835 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 TRIML1Q8N9V2 468 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 OR2I1PQ8NGU4 316 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 ZNF507Q8TCN5 953 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 IPO4Q8TEX9 1081 aaKnown RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 SYAP1Q96A49 352 aaPredicted RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 SMARCD1Q96GM5 515 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 MED10Q9BTT4 135 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 DMAP1Q9NPF5 467 aaPredicted RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 DNAJC17Q9NVM6 304 aaKnown RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 COMMD8Q9NX08 183 aa16.69■□□□□ 0.26
LMNA-223ENST00000515459 MORC2Q9Y6X9 1032 aaPredicted RBP16.69■□□□□ 0.26
LMNA-223ENST00000515459 MYH10P35580 1976 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 FAM92AA1XBS5 289 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 TAF4O00268 1085 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 TGFB1I1O43294 461 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 ZDHHC11BP0C7U3 371 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 NDUFV2P19404 249 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 CYP2J2P51589 502 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 TRIP6Q15654 476 aaKnown RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 HTR3DQ70Z44 454 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms