RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PIPSLA2A3N6 862 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 FAM153BP0C7A2 387 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 POU1F1P28069 291 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 GSTT1P30711 240 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-214ENST00000515035 CYP51A1Q16850 503 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 FAM153CQ494X1 144 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 ATP6AP1LQ52LC2 224 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 TTI2Q6NXR4 508 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 LINC00523Q86TU6 105 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 MYLK2Q9H1R3 596 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 RNPEPL1Q9HAU8 725 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 PRG3Q9Y2Y8 225 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-214ENST00000515035 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
TCOF1-214ENST00000515035 SDR42E2A6NKP2 422 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 TAF4O00268 1085 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 SNPHO15079 494 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 AGKQ53H12 422 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 DCAF6Q58WW2 860 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-214ENST00000515035 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 KRT84Q9NSB2 600 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 ITGA4P13612 1032 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 CPB1P15086 417 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 TALDO1P37837 337 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 IFI35P80217 286 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-214ENST00000515035 TFDP3Q5H9I0 405 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 FAM45BPQ6NSW5 357 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 AGAP11Q8TF27 550 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 TCF7L2Q9NQB0 619 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 POLE3Q9NRF9 147 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 MAP3K6O95382 1288 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 SGPL1O95470 568 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 ERVK-9P63128 1117 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 BMPR2Q13873 1038 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 B3GNT6Q6ZMB0 384 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 ATG16L2Q8NAA4 619 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 SLC7A14Q8TBB6 771 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 ZFYVE28Q9HCC9 887 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 AGPAT3Q9NRZ7 376 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 INTS13Q9NVM9 706 aa13.71□□□□□ -0.21
TCOF1-214ENST00000515035 SNRPFP62306 86 aaKnown RBP13.71□□□□□ -0.22
TCOF1-214ENST00000515035 GALNTL6Q49A17 601 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 OTUD3Q5T2D3 398 aaPredicted RBP13.71□□□□□ -0.22
TCOF1-214ENST00000515035 DENND5BQ6ZUT9 1274 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 TDRD5Q8NAT2 981 aaKnown RBP13.71□□□□□ -0.22
TCOF1-214ENST00000515035 MTMR8Q96EF0 704 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 SPRTNQ9H040 489 aaPredicted RBP13.71□□□□□ -0.22
TCOF1-214ENST00000515035 CYP39A1Q9NYL5 469 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 NCKIPSDQ9NZQ3 722 aa13.71□□□□□ -0.22
TCOF1-214ENST00000515035 PEX1O43933 1283 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 CNTFP26441 200 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 HPCAP84074 193 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 A0A087WXM4 84 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 A0A0A6YYK5 440 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-214ENST00000515035 MEI4A8MW99 385 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 AHCYL1O43865 530 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 SLC9A5Q14940 896 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 DGKDQ16760 1214 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 C2CD6Q53TS8 623 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 NANOGNBQ7Z5D8 188 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 MIER2Q8N344 545 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 POU5F2Q8N7G0 328 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 TMEM121Q9BTD3 319 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 FANCEQ9HB96 536 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 RABGEF1Q9UJ41 708 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 VWA5AO00534 786 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 PMPCBO75439 489 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 PARNO95453 639 aaKnown RBP13.7□□□□□ -0.22
TCOF1-214ENST00000515035 GRIK1P39086 918 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ACADSBP45954 432 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 CCNG2Q16589 344 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 YTHDF3Q7Z739 585 aaKnown RBP13.7□□□□□ -0.22
TCOF1-214ENST00000515035 TBC1D19Q8N5T2 526 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ARMCX1Q9P291 453 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 MAP2K7O14733 419 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ZNF682O95780 498 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ALOX12P18054 663 aa13.7□□□□□ -0.22
TCOF1-214ENST00000515035 ROR2Q01974 943 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms