RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 KIF5CO60282 957 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 SLU7O95391 586 aaKnown RBP8.77□□□□□ -1.01
CCL28-204ENST00000514421 KRT5P13647 590 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 UCHL3P15374 230 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 NPR3P17342 541 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 PFKLP17858 780 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 HDCP19113 662 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 VIPR2P41587 438 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 VAV2P52735 878 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 GNG11P61952 73 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 CYP4F8P98187 520 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 SIGLEC14Q08ET2 396 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 TAF10Q12962 218 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 STILQ15468 1287 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 TXNDC8Q6A555 127 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 LCLAT1Q6UWP7 414 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 TRIM67Q6ZTA4 783 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 CLEC20AQ6ZU45 233 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 IRF2BP2Q7Z5L9 587 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 FMNL3Q8IVF7 1028 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 MFSD6LQ8IWD5 586 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 CMTM8Q8IZV2 173 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 MAB21L3Q8N8X9 362 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 STKLD1Q8NE28 680 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 ACRBPQ8NEB7 543 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 PDZD8Q8NEN9 1154 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 ST13P5Q8NFI4 369 aaPredicted RBP8.77□□□□□ -1.01
CCL28-204ENST00000514421 SCAMP5Q8TAC9 235 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 OVCA2Q8WZ82 227 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 ANKRD7Q92527 254 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 PCMTD1Q96MG8 357 aaPredicted RBP8.77□□□□□ -1.01
CCL28-204ENST00000514421 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1.01
CCL28-204ENST00000514421 C1QTNF1Q9BXJ1 281 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 PLA2G2FQ9BZM2 168 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 TSGA10Q9BZW7 698 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 PNPLA8Q9NP80 782 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 OBP2AQ9NY56 170 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 HESX1Q9UBX0 185 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 DNAJC12Q9UKB3 198 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 NENFQ9UMX5 172 aa8.77□□□□□ -1.01
CCL28-204ENST00000514421 BZW2Q9Y6E2 419 aaKnown RBP8.77□□□□□ -1.01
CCL28-204ENST00000514421 NOTCH4Q99466 2003 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 A0A0U1RQJ8 604 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 FAM92AA1XBS5 289 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ZNF840PA6NDX5 716 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 HEPACAM2A8MVW5 462 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 BTNL10A8MVZ5 291 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 HHLA1C9JL84 531 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 O00370 1275 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 FOXN3O00409 490 aaPredicted RBP8.76□□□□□ -1.01
CCL28-204ENST00000514421 KRT86O43790 486 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 GPR37L1O60883 481 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 GFPT2O94808 682 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ABL1P00519 1130 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 SRFP11831 508 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 PSMC3P17980 439 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 CASQ1P31415 396 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 AVPR1AP37288 418 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 USP8P40818 1118 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 PDE6CP51160 858 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 KIF11P52732 1056 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ZNF132P52740 706 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 SLC5A3P53794 718 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 POLR2FP61218 127 aaKnown RBP8.76□□□□□ -1.01
CCL28-204ENST00000514421 GPC5P78333 572 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ARHGAP44Q17R89 818 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ARHGAP29Q52LW3 1261 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 C10orf76Q5T2E6 689 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 STXBP5Q5T5C0 1151 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 SFMBT2Q5VUG0 894 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 SNX30Q5VWJ9 437 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 CACNA2D4Q7Z3S7 1137 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 TXLNBQ8N3L3 684 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 CELF5Q8N6W0 485 aaKnown RBP8.76□□□□□ -1.01
CCL28-204ENST00000514421 RBBP8NLQ8NC74 664 aaPredicted RBP8.76□□□□□ -1.01
CCL28-204ENST00000514421 UBA3Q8TBC4 463 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 DEPDC1BQ8WUY9 529 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ATRIPQ8WXE1 791 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 TFAP2BQ92481 460 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 FBXO32Q969P5 355 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 CCDC42Q96M95 316 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 CYP2S1Q96SQ9 504 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 KXD1Q9BQD3 176 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 TRMT61BQ9BVS5 477 aaKnown RBP8.76□□□□□ -1.01
CCL28-204ENST00000514421 SLC2A4RGQ9NR83 387 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 WNT16Q9UBV4 365 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 TSPAN16Q9UKR8 245 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 DUSP12Q9UNI6 340 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 MRFAP1Q9Y605 127 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 F5P12259 2224 aa8.76□□□□□ -1.01
CCL28-204ENST00000514421 TRAV19A0A0A6YYK7 116 aa8.75□□□□□ -1.01
CCL28-204ENST00000514421 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
CCL28-204ENST00000514421 TMEM221A6NGB7 291 aa8.75□□□□□ -1.01
CCL28-204ENST00000514421 M0R296 226 aa8.75□□□□□ -1.01
CCL28-204ENST00000514421 XPO1O14980 1071 aaKnown RBP8.75□□□□□ -1.01
CCL28-204ENST00000514421 MED7O43513 233 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms