RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ASMTLO95671 621 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 RBP3P10745 1247 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 P4HA1P13674 534 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 PHBP35232 272 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 MSH2P43246 934 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 INHBCP55103 352 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 C15orf59Q2T9L4 293 aaPredicted RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 OR6B2Q6IFH4 312 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 C3orf62Q6ZUJ4 267 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 GBP7Q8N8V2 638 aaPredicted RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 SLCO1B3Q9NPD5 702 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 DMAP1Q9NPF5 467 aaPredicted RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 EFR3BQ9Y2G0 817 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 PRPF4O43172 522 aaKnown RBP eCLIP13.09□□□□□ -0.31
SDHA-216ENST00000514027 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 APOC2P02655 101 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 MCF2P10911 925 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 KRT4P19013 534 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 GNAZP19086 355 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 NDST1P52848 882 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 CDH6P55285 790 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 TNFAIP2Q03169 654 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 MGAT5Q09328 741 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 OR52E8Q6IFG1 317 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 DARS2Q6PI48 645 aaKnown RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 PALM2Q8IXS6 379 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 NAT8LQ8N9F0 302 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 LRRC8CQ8TDW0 803 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 FBF1Q8TES7 1133 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 PIWIL1Q96J94 861 aaKnown RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 PEBP4Q96S96 227 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 NDNQ99608 321 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 RXFP1Q9HBX9 757 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 PREBQ9HCU5 417 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 GRID1Q9ULK0 1009 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
SDHA-216ENST00000514027 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 E5RJQ4 531 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 GOLGA8RI6L899 631 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 LGALS2P05162 132 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 OSBPP22059 807 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 GPD2P43304 727 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 RGS7P49802 495 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ROR1Q01973 937 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 SEPT7Q16181 437 aaKnown RBP13.08□□□□□ -0.32
SDHA-216ENST00000514027 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 FOXB2Q5VYV0 432 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SDHA-216ENST00000514027 C1orf228Q6PIY5 440 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
SDHA-216ENST00000514027 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
SDHA-216ENST00000514027 KLHL29Q96CT2 875 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 PAFAH2Q99487 392 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 FRMD8P1Q9BZ68 369 aaPredicted RBP13.08□□□□□ -0.32
SDHA-216ENST00000514027 SENP1Q9P0U3 644 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 DLGAP2Q9P1A6 1054 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 SLC24A2Q9UI40 661 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 TMCO1Q9UM00 188 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 STK38LQ9Y2H1 464 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 H7C0C1 242 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 SMAPO00193 183 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 CXCL11O14625 94 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 VDRP11473 427 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ACADSP16219 412 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 PDGFRAP16234 1089 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 DESP17661 470 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 GPD1P21695 349 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ATICP31939 592 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ATP5OP48047 213 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 BNIP1Q12981 228 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 KRT81Q14533 505 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 AMHR2Q16671 573 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 EFHC2Q5JST6 749 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 FAM183BPQ6ZVS7 135 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
SDHA-216ENST00000514027 RXFP2Q8WXD0 754 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms