RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ABHD2P08910 425 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ATICP31939 592 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 HADHAP40939 763 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PTGIRP43119 386 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ARPP19P56211 112 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 DPYSL3Q14195 570 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 C4orf19Q8IY42 314 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ALLCQ8N6M5 410 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 STKLD1Q8NE28 680 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SHC3Q92529 594 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CDRT15Q96T59 188 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 GORASP1Q9BQQ3 440 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PLEKHA5Q9HAU0 1116 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 GRK2P25098 689 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NCKAP1LP55160 1127 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 RHBDL3P58872 404 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 MXD4Q14582 209 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PDK1Q15118 436 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 KHDC1Q4VXA5 237 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ZDHHC24Q6UX98 284 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NPNTQ6UXI9 565 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 FRA10AC1Q70Z53 315 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 MARK2Q7KZI7 788 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PPHLN1Q8NEY8 458 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PDCD6IPQ8WUM4 868 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 VPS50Q96JG6 964 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SEMA6AQ9H2E6 1030 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 RUVBL2Q9Y230 463 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NID2Q14112 1375 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 WDR27A2RRH5 827 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 LIN7AO14910 233 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SERPINE1P05121 402 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SP100P23497 879 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ARHGDIAP52565 204 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 RBBP7Q16576 425 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NRF1Q16656 503 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ANO4Q32M45 955 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 C6orf10Q5SRN2 563 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 FOXR2Q6PJQ5 311 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ANGPTL8Q6UXH0 198 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ZBTB49Q6ZSB9 765 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 GMCL1P1Q8NEA9 526 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CNTNAP4Q9C0A0 1308 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SAC3D1A6NKF1 404 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 RPL22P35268 128 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SERPINB8P50452 374 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ADARP55265 1226 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 JAM2P57087 298 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NET1Q7Z628 596 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SNX32Q86XE0 403 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ULK2Q8IYT8 1036 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CYP4X1Q8N118 509 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 TTC39CQ8N584 583 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 TTLL6Q8N841 843 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SEMA4DQ92854 862 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 IFT43Q96FT9 208 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 DDX28Q9NUL7 540 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 LSM8O95777 96 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 IL1R1P14778 569 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 KCNA2P16389 499 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 MLH1P40692 756 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ACAP1Q15027 740 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PDK3Q15120 406 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 C6orf89Q6UWU4 347 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ADCK1Q86TW2 530 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 GSTCDQ8NEC7 633 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 KREMEN1Q96MU8 473 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 MMADHCQ9H3L0 296 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 IARS2Q9NSE4 1012 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 BTBD7Q9P203 1132 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CHKBQ9Y259 395 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 XRN1Q8IZH2 1706 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 A0A0B4J269 797 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 GOLGA8CPA6NN73 597 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 PSMD10O75832 226 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 TNFAIP8O95379 198 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 VIL1P09327 827 aaKnown RBP8.01□□□□□ -1.13
CLCN3-209ENST00000513761 FGFR3P22607 806 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CDH8P55286 799 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 STX5Q13190 355 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 UGP2Q16851 508 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 TRIM16LQ309B1 348 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 FUT11Q495W5 492 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SLFN11Q7Z7L1 901 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SH3TC2Q8TF17 1288 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 LPAR1Q92633 364 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 VCPIP1Q96JH7 1222 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 CNPY3Q9BT09 278 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF518BQ9C0D4 1074 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 NMUR2Q9GZQ4 415 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 BCAS3Q9H6U6 928 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 ZDHHC18Q9NUE0 388 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 HACD3Q9P035 362 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 BCL9O00512 1426 aa8.01□□□□□ -1.13
CLCN3-209ENST00000513761 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms