RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NAA15Q9BXJ9 866 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 SMG9Q9H0W8 520 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 XYLT2Q9H1B5 865 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 KCTD10Q9H3F6 313 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 HPS4Q9NQG7 708 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 GKN1Q9NS71 199 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 MAPK8IP1Q9UQF2 711 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 NUP205Q92621 2012 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 A0A1W2PQC6 194 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 LRRIQ3A6PVS8 624 aaPredicted RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 LGALS16A8MUM7 142 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 TRIM66O15016 1216 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 TEX33O43247 280 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 KIF20AO95235 890 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 USP17L7P0C7H9 530 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 PFKLP17858 780 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 BDNFP23560 247 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 CXCL12P48061 93 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 MYL6P60660 151 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 TNNC1P63316 161 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 NOP14P78316 857 aaKnown RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 USP4Q13107 963 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 TRPC3Q13507 836 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 RUNX3Q13761 415 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 PON2Q15165 354 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 ZNF77Q15935 545 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 SWT1Q5T5J6 900 aaKnown RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 DENND5BQ6ZUT9 1274 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 CNGA4Q8IV77 575 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 TC2NQ8N9U0 490 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 RIN3Q8TB24 985 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 PLEKHO2Q8TD55 490 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 C8orf48Q96LL4 319 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 SRRTQ9BXP5 876 aaKnown RBP10.46□□□□□ -0.74
CCL28-203ENST00000513525 SNX25Q9H3E2 840 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 EHD2Q9NZN4 543 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 GCNT4Q9P109 453 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.74
CCL28-203ENST00000513525 PLXND1Q9Y4D7 1925 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TRAV19A0A0A6YYK7 116 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TRIM49BA6NDI0 452 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 C4BPAP04003 597 aaKnown RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 PDGFRBP09619 1106 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TNNT1P13805 278 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 FECHP22830 423 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 ANXA13P27216 316 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 GRIK1P39086 918 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 CASP4P49662 377 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 PDE6CP51160 858 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 PMS1P54277 932 aaKnown RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 SATB1Q01826 763 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 CYP27A1Q02318 531 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 MTF1Q14872 753 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 PDGFRLQ15198 375 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 MDH1BQ5I0G3 518 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TDRD10Q5VZ19 366 aaKnown RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 E4F1Q66K89 784 aaPredicted RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 TMEM139Q8IV31 216 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 OR6B3Q8NGW1 331 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TTC8Q8TAM2 541 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 IQCDQ96DY2 449 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 CHFRQ96EP1 664 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 TSG101Q99816 390 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 RBM12Q9NTZ6 932 aaKnown RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 TAB2Q9NYJ8 693 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 SMG5Q9UPR3 1016 aaKnown RBP10.45□□□□□ -0.74
CCL28-203ENST00000513525 TRAF3IP3Q9Y228 551 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 CEP192Q8TEP8 1941 aa10.45□□□□□ -0.74
CCL28-203ENST00000513525 GOLGA6L9A6NEM1 432 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 OTOL1A6NHN0 477 aaPredicted RBP10.44□□□□□ -0.74
CCL28-203ENST00000513525 A8MXQ7 604 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 RNF223E7ERA6 249 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 TRDMT1O14717 391 aaKnown RBP10.44□□□□□ -0.74
CCL28-203ENST00000513525 MAPK13O15264 365 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 ZSCAN12O43309 604 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 MFAP3LO75121 409 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 PHACTR2O75167 634 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 CKMP06732 381 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 PTPN1P18031 435 aaKnown RBP10.44□□□□□ -0.74
CCL28-203ENST00000513525 ID4P47928 161 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 PPP3CCP48454 512 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 AMPD2Q01433 879 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 BIRC3Q13489 604 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 NFIL3Q16649 462 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 ZNF699Q32M78 642 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 TMEM196Q5HYL7 178 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 ANKRD40Q6AI12 368 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 TRIM68Q6AZZ1 485 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 CC2D1AQ6P1N0 951 aaPredicted RBP10.44□□□□□ -0.74
CCL28-203ENST00000513525 Q6ZS52 159 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 KIAA1958Q8N8K9 716 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 B3GALNT2Q8NCR0 500 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 MYRIPQ8NFW9 859 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 OSCP1Q8WVF1 389 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 C16orf45Q96MC5 204 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms