RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 E9PMD0 336 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 FAM189A1O60320 539 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 C1QL1O75973 258 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 RARAP10276 462 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 HAPLN1P10915 354 aaPredicted RBP13.23□□□□□ -0.29
SDHA-215ENST00000512962 LILRA4P59901 499 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 ZXDBP98169 803 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 LMAN2Q12907 356 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 CRY1Q16526 586 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 KCNK18Q7Z418 384 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 OR13H1Q8NG92 308 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 LRIG1Q96JA1 1093 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 GTPBP2Q9BX10 602 aaKnown RBP13.23□□□□□ -0.29
SDHA-215ENST00000512962 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 GMPR2Q9P2T1 348 aaKnown RBP13.23□□□□□ -0.29
SDHA-215ENST00000512962 PILRBQ9UKJ0 227 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
SDHA-215ENST00000512962 SGK1O00141 431 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 EPB41L2O43491 1005 aaKnown RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 PFKFB2O60825 505 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 CFIP05156 583 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 NFKB1P19838 968 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 RAD51AP2Q09MP3 1159 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 MON1AQ86VX9 555 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 SYT12Q8IV01 421 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 ALLCQ8N6M5 410 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 RNF34Q969K3 372 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 PNMA5Q96PV4 448 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 NUSAP1Q9BXS6 441 aaKnown RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 KIF9Q9HAQ2 790 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 CAPN10Q9HC96 672 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
SDHA-215ENST00000512962 HSFX1Q9UBD0 423 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 ACACAQ13085 2346 aa13.22□□□□□ -0.29
SDHA-215ENST00000512962 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 MAST4O15021 2626 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 PP2D1A8MPX8 630 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 JAK2O60674 1132 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 TOM1L1O75674 476 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 CDKL5O76039 1030 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 REC8O95072 547 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 NFICP08651 508 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 XBP1P17861 261 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 CD33P20138 364 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 MCL1Q07820 350 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 EMC10Q5UCC4 262 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 SCARA3Q6AZY7 606 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 LPCAT2Q7L5N7 544 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 C12orf40Q86WS4 652 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 MINDY1Q8N5J2 469 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 SLC30A3Q99726 388 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.29
SDHA-215ENST00000512962 UBQLN1Q9UMX0 589 aaKnown RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 MUC22E2RYF6 1773 aaPredicted RBP13.21□□□□□ -0.29
SDHA-215ENST00000512962 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 H0Y626 953 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 SH3BP5O60239 455 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 ADAM23O75077 832 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 GJB3O75712 270 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 TRIM16O95361 564 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 CYP11A1P05108 521 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 FTH1P19P0C7X4 201 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 ODC1P11926 461 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 CYP3A5P20815 502 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 SLC6A11P48066 632 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 TUFMP49411 452 aaKnown RBP13.2□□□□□ -0.3
SDHA-215ENST00000512962 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDHA-215ENST00000512962 ZNF174Q15697 407 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 SPATA1Q5VX52 437 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 C9orf57Q5W0N0 161 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 SLCO6A1Q86UG4 719 aa13.2□□□□□ -0.3
SDHA-215ENST00000512962 IL17RCQ8NAC3 791 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms