RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 GRIK1P39086 918 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 EFNA5P52803 228 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 C21orf59P57076 290 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 SLC7A9P82251 487 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 STARD3Q14849 445 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 SDHAF4Q5VUM1 108 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 CLEC14AQ86T13 490 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 LRRTM3Q86VH5 581 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 NAT16Q8N8M0 369 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 MIB2Q96AX9 1013 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 MOCOSQ96EN8 888 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 ACE2Q9BYF1 805 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 KDM4CQ9H3R0 1056 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 PTPRHQ9HD43 1115 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 NUMA1Q14980 2115 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 A1L4Q6 167 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 TRIM24O15164 1050 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 ZBTB43O43298 467 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 MCF2P10911 925 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 CD27P26842 260 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 CDC27P30260 824 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 ZNF132P52740 706 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 CLCA4Q14CN2 919 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 SAFBQ15424 915 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLCN3-208ENST00000512813 C3orf38Q5JPI3 329 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 PRAMEF14Q5SWL7 426 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 NCAPH2Q6IBW4 605 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 GRAMD4Q6IC98 578 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 ATCAYQ86WG3 371 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 PIGOQ8TEQ8 1089 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 NANOS1Q8WY41 292 aaKnown RBP10.06□□□□□ -0.8
CLCN3-208ENST00000512813 SIPA1Q96FS4 1042 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 SENP8Q96LD8 212 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 DRC1Q96MC2 740 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 FUCA2Q9BTY2 467 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 SATB2Q9UPW6 733 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
CLCN3-208ENST00000512813 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 PRRT4C9JH25 899 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 OPA1O60313 960 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 TSPAN3O60637 253 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 PRPF40AO75400 957 aaKnown RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 CYP3A5P20815 502 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 PAX3P23760 479 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 COL8A1P27658 744 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 ARRB1P49407 418 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 LILRA4P59901 499 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 C1QL3Q5VWW1 255 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 TMPRSS6Q8IU80 811 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 NSUN7Q8NE18 718 aaKnown RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 SCFD1Q8WVM8 642 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 PRCCQ92733 491 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 BIRC7Q96CA5 298 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 OTUB2Q96DC9 234 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 PRR11Q96HE9 360 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 ACO2Q99798 780 aaKnown RBP10.05□□□□□ -0.8
CLCN3-208ENST00000512813 HSD17B14Q9BPX1 270 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 ORAI3Q9BRQ5 295 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 KIFC3Q9BVG8 833 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 CFAP97Q9P2B7 532 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 DSEQ9UL01 958 aa10.05□□□□□ -0.8
CLCN3-208ENST00000512813 CCDC168Q8NDH2 2452 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 WIPF3A6NGB9 483 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 WASH3PC4AMC7 463 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 ABLIM1O14639 778 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 PPEF2O14830 753 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 OLFM2O95897 454 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 RNF224P0DH78 156 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 ACADMP11310 421 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 PROZP22891 400 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 MORC3Q14149 939 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 PPP2R5AQ15172 486 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 ZBTB6Q15916 424 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 DDR2Q16832 855 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 FHL5Q5TD97 284 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 MAMDC2Q7Z304 686 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 FAM124AQ86V42 546 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 DCP1BQ8IZD4 617 aaKnown RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 LEO1Q8WVC0 666 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 HAS1Q92839 578 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 EIF2AK1Q9BQI3 630 aaKnown RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 DKK3Q9UBP4 350 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms