RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ANAPC15P60006 121 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 RPS16P62249 146 aaKnown RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 YPEL5P62699 121 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 IGBP1P78318 339 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 TIAL1Q01085 375 aaKnown RBP eCLIP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF91Q05481 1191 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 STK3Q13188 491 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 KCNAB1Q14722 419 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF750Q32MQ0 723 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 TMTC4Q5T4D3 741 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 C10orf25Q5T742 122 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 PIP4P1Q86T03 277 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 SESTD1Q86VW0 696 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 LIX1LQ8IVB5 337 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 LINC01465Q8N7H1 131 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 WASF1Q92558 559 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 SPSB4Q96A44 273 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 TRIM43Q96BQ3 446 aaPredicted RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 CAMK1GQ96NX5 476 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 FYTTD1Q96QD9 318 aaKnown RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 FAM118BQ9BPY3 351 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 VN1R3Q9BXE9 311 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 CHST8Q9H2A9 424 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 DKK4Q9UBT3 224 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 TPCN1Q9ULQ1 816 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 LY6G6EA0A0G2JKS1 128 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 LOC102723971A0A1B0GUV8 181 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 C16orf96A6NNT2 1141 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 BTBD19C9JJ37 291 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 TMEM232C9JQI7 657 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 H3BNC9 293 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 CA12O43570 354 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 USP1O94782 785 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 IL1R1P14778 569 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 BRAFP15056 766 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 BTF3P20290 206 aaKnown RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 EPHA3P29320 983 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 CCT4P50991 539 aaKnown RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 PGDP52209 483 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 EPHB1P54762 984 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 SUMO2P61956 95 aaKnown RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 GHRHRQ02643 423 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 SLC14A1Q13336 389 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 CNGA2Q16280 664 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 LEXMQ3ZCV2 418 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 TMEM65Q6PI78 240 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF517Q6ZMY9 492 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 DCDC5Q6ZRR9 648 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 USP49Q70CQ1 688 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 RAB11FIP4Q86YS3 637 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 CHPFQ8IZ52 775 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 SAMD14Q8IZD0 417 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF548Q8NEK5 533 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 OSR1Q8TAX0 266 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 NMD3Q96D46 503 aaKnown RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 EDC3Q96F86 508 aaKnown RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 VCPIP1Q96JH7 1222 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 PPP1R9BQ96SB3 815 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 BRIP1Q9BX63 1249 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 FOXP1Q9H334 677 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-208ENST00000512711 MLXIPLQ9NP71 852 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 HEY2Q9UBP5 337 aa2.8□□□□□ -1.96
PDGFC-208ENST00000512711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 F8W8V4 182 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 SOCS2O14508 198 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 FYB1O15117 783 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 TLR2O60603 784 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 PRAMEF2O60811 474 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 YY1P25490 414 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 POLGP54098 1239 aaPredicted RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 GPC5P78333 572 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 CFHR1Q03591 330 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 LAMB3Q13751 1172 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 ARHGEF7Q14155 803 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 MFSD13AQ14CX5 517 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 LARS2Q15031 903 aaKnown RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 INSCQ1MX18 579 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 ARHGAP29Q52LW3 1261 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 RNF220Q5VTB9 566 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 RUSC1-AS1Q66K80 236 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 GRHL2Q6ISB3 625 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 CLEC9AQ6UXN8 241 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 UNC13DQ70J99 1090 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 C12orf76Q8N812 135 aaPredicted RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 FAM156AQ8NDB6 213 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 WIPF2Q8TF74 440 aaPredicted RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 SUCLG2Q96I99 432 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 EBF3Q9H4W6 596 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 GAR1Q9NY12 217 aaKnown RBP2.79□□□□□ -1.96
PDGFC-208ENST00000512711 MID2Q9UJV3 735 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 HDAC9Q9UKV0 1011 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 RIMKLBQ9ULI2 386 aa2.79□□□□□ -1.96
PDGFC-208ENST00000512711 ISM1B1AKI9 464 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 INSIG1O15503 277 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 PIAS2O75928 621 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 MAP4K4O95819 1239 aaPredicted RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 SCGB1D2O95969 90 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 MBPP02686 304 aaPredicted RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 SNHG28P0DPA3 235 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms