RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.93
VCAN-208ENST00000512590 DCLK1O15075 740 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 PABPC1P11940 636 aaKnown RBP9.21□□□□□ -0.94
VCAN-208ENST00000512590 PHF19Q5T6S3 580 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 ZNF618Q5T7W0 954 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SPATA21Q7Z572 469 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 IZUMO1Q8IYV9 350 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 FAM98AQ8NCA5 519 aaKnown RBP9.21□□□□□ -0.94
VCAN-208ENST00000512590 RDM1Q8NG50 284 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
VCAN-208ENST00000512590 MROH8Q9H579 483 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 COMMD9Q9P000 198 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 ADAM30Q9UKF2 790 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 MTMR6Q9Y217 621 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 PCDHGB5Q9Y5G0 923 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 IL1BP01584 269 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SERPING1P05155 500 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 PDHA1P08559 390 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 PFKFB1P16118 471 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 ITPKBP27987 946 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SLC7A2P52569 658 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.94
VCAN-208ENST00000512590 FOXK1P85037 733 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 GRSF1Q12849 480 aaKnown RBP eCLIP9.21□□□□□ -0.94
VCAN-208ENST00000512590 SLFNL1Q499Z3 407 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 NUGGCQ68CJ6 796 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 FBXO38Q6PIJ6 1188 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 ADSSL1Q8N142 457 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 GAL3ST3Q96A11 431 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 STRADBQ9C0K7 418 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 TASP1Q9H6P5 420 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SLC35C2Q9NQQ7 365 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 IFT52Q9Y366 437 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 TOPBP1Q92547 1522 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 TMEM265A0A087WTH1 108 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 F5H6K3 240 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 CYB561D2O14569 222 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 MAGEB3O15480 346 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 CRTAMO95727 393 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 JMJD7P0C870 316 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 AGXTP21549 392 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 GEMP55040 296 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 KLRC3Q07444 240 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 KRR1Q13601 381 aaKnown RBP9.21□□□□□ -0.94
VCAN-208ENST00000512590 GRB14Q14449 540 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 PDK1Q15118 436 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 POM121L1PQ3SYA9 428 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 RAET1GQ6H3X3 334 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 MRNIPQ6NTE8 343 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 G2E3Q7L622 706 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 RSPH1Q8WYR4 309 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 C18orf8Q96DM3 657 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 CYFIP2Q96F07 1278 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 OLFM1Q99784 485 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SERHL2Q9H4I8 314 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 SERHLQ9NQF3 203 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 CLIC5Q9NZA1 410 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
VCAN-208ENST00000512590 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 WASHC1A8K0Z3 465 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 WASH3PC4AMC7 463 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 TBX3O15119 743 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ACSL3O95573 720 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ADH1CP00326 375 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 OR56A5P0C7T3 313 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 CREB1P16220 341 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 PLCG1P19174 1290 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 RBMS1P29558 406 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 ADORA1P30542 326 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 INHBEP58166 350 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 RAB14P61106 215 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 COX10Q12887 443 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SPARCL1Q14515 664 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ALLCQ8N6M5 410 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ZNF563Q8TA94 476 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 USP6NLQ92738 828 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 KCNB2Q92953 911 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FERD3LQ96RJ6 166 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 KLHL1Q9NR64 748 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 USP19O94966 1318 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CPED1A4D0V7 1026 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ANXA9O76027 345 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CXCL14O95715 111 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CYB5AP00167 134 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 PDGFRAP16234 1089 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
VCAN-208ENST00000512590 PLA2G4AP47712 749 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 TUFMP49411 452 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 EMC2Q15006 297 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SLC15A2Q16348 729 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 LCORLQ8N3X6 602 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 RNFT2Q96EX2 444 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FAM20AQ96MK3 541 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CBWD1Q9BRT8 395 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms