RNA–Protein interactions for RNA: ENST00000512537.1

ACSF2-222, Transcript of acyl-CoA synthetase family member 2, human

TSL 2

Gene ACSF2, Length 483 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-222	ENST00000512537	SCAMP3	O14828	347 aa	Known RBP	13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	ACO1	P21399	889 aa	Known RBP	13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	EIF2D	P41214	584 aa	Known RBP	13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	ZNF394	Q53GI3	561 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	LAIR1	Q6GTX8	287 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	KIAA2013	Q8IYS2	634 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	TATDN2	Q93075	761 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	JAKMIP2	Q96AA8	810 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	TMEM176A	Q96HP8	235 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	HEXIM2	Q96MH2	286 aa	Known RBP	13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	ARID3A	Q99856	593 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	SH3BP1	Q9Y3L3	701 aa		13.16	□□□□□ -0.3
ACSF2-222	ENST00000512537	BICDL2	A1A5D9	508 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	PMM2	O15305	246 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	CYP26A1	O43174	497 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	HR	O43593	1189 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	GADD45B	O75293	160 aa	Predicted RBP	13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	ADH5	P11766	374 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	CD44	P16070	742 aa	Known RBP	13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	PGF	P49763	221 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	PSEN1	P49768	467 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	KIF11	P52732	1056 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	RAD23B	P54727	409 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	YWHAE	P62258	255 aa	Known RBP	13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	CUL2	Q13617	745 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	MORC3	Q14149	939 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	SIM2	Q14190	667 aa	Predicted RBP	13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	ARHGAP17	Q68EM7	881 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	ISM2	Q6H9L7	571 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	TTI2	Q6NXR4	508 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	KLHDC10	Q6PID8	442 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	RHBDF2	Q6PJF5	856 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	PRR23B	Q6ZRT6	265 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	SYT13	Q7L8C5	426 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	CCDC186	Q7Z3E2	898 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	CAMKK1	Q8N5S9	505 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	SLC4A11	Q8NBS3	891 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	RPLP0P6	Q8NHW5	317 aa		13.15	□□□□□ -0.3
ACSF2-222	ENST00000512537	WDR87	Q6ZQQ6	2873 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	ATG2B	Q96BY7	2078 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	PPP1R3G	B7ZBB8	358 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	HOXC11	O43248	304 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	RET	P07949	1114 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	BMP6	P22004	513 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	TBXAS1	P24557	533 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	ATP5C1	P36542	298 aa	Known RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	ID4	P47928	161 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	FMO5	P49326	533 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	GAD2	Q05329	585 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	GOLGA8F	Q08AF8	430 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	GOLGA8DP	Q0D2H9	430 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	SRSF5	Q13243	272 aa	Known RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	DMC1	Q14565	340 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	CCDC40	Q4G0X9	1142 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	KLHL10	Q6JEL2	608 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	TADA2B	Q86TJ2	420 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	BBS7	Q8IWZ6	715 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	ZNF276	Q8N554	614 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	USP33	Q8TEY7	942 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	GAB3	Q8WWW8	586 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	NELFB	Q8WX92	580 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	PNKP	Q96T60	521 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	KLF16	Q9BXK1	252 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	UBXN6	Q9BZV1	441 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	NMUR1	Q9HB89	426 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	OSER1	Q9NX31	292 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	CLIC5	Q9NZA1	410 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	LSM7	Q9UK45	103 aa	Known RBP	13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	USP3	Q9Y6I4	520 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537	MYO16	Q9Y6X6	1858 aa		13.14	□□□□□ -0.31
ACSF2-222	ENST00000512537		A0A1W2PQH9	124 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537		K7EQS6	105 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	P4HA2	O15460	535 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	APBB3	O95704	486 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	TBX18	O95935	607 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	APOD	P05090	189 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	IRF1	P10914	325 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	RARG	P13631	454 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	HOXC13	P31276	330 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	SLC8A3	P57103	927 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	LMNB2	Q03252	620 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	PAK1	Q13153	545 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	LPAL2	Q16609	132 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	LY6G5C	Q5SRR4	150 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	HTR3D	Q70Z44	454 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	CEP68	Q76N32	757 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	UBR7	Q8N806	425 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	TRIML1	Q8N9V2	468 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	ANKRD52	Q8NB46	1076 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	NT5C1B	Q96P26	610 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	DNMT3L	Q9UJW3	386 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	NAGPA	Q9UK23	515 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	CTNND2	Q9UQB3	1225 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537	KIAA1549L	Q6ZVL6	1849 aa		13.13	□□□□□ -0.31
ACSF2-222	ENST00000512537		A0A0A0MRY4	1105 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms