RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MFAP3P55082 362 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 MLLT6P55198 1093 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 KLHL30Q0D2K2 578 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ELAVL2Q12926 359 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 CCINQ13939 588 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 MTF1Q14872 753 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 SPA17Q15506 151 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 TEAD2Q15562 447 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ASIC2Q16515 512 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 C1orf228Q6PIY5 440 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 VPS36Q86VN1 386 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 CCDC127Q96BQ5 260 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 MSANTD3Q96H12 275 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ADPGKQ9BRR6 497 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 SLC32A1Q9H598 525 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 CYP4F11Q9HBI6 524 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ADAMTS9Q9P2N4 1935 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 AKAP13Q12802 2813 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 CCDC163A0A0D9SF12 145 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ARHGEF37A1IGU5 675 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 KRT86O43790 486 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 SEC24AO95486 1093 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ASS1P00966 412 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TNNT1P13805 278 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 FGFR3P22607 806 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 MAPK8P45983 427 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ACOT2P49753 483 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ROR1Q01973 937 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 C19orf57Q0VDD7 668 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TCEAL1Q15170 157 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 EEF1DP3Q658K8 133 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 SLC27A1Q6PCB7 646 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 RTL10Q7L3V2 364 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ELMOD1Q8N336 334 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 C17orf53Q8N3J3 647 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 RNF10Q8N5U6 811 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 SLC30A5Q8TAD4 765 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 OLIG1Q8TAK6 271 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 SEMA4DQ92854 862 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ABCA7Q8IZY2 2146 aa11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 ASCC3Q8N3C0 2202 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-217ENST00000512274 PTGESO14684 152 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 AKR1B10O60218 316 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 MICAL2O94851 1124 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 VNN1O95497 513 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 HLA-DRAP01903 254 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 THP07101 528 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 DLATP10515 647 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 HARSP12081 509 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 TNNI1P19237 187 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 ATICP31939 592 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 BRCC3P46736 316 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 WNT7BP56706 349 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 TNK2Q07912 1038 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 ARHGAP29Q52LW3 1261 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 XKR4Q5GH76 650 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 PPP1R2P3Q6NXS1 205 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF677Q86XU0 584 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 SYNPOQ8N3V7 929 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 KIF18AQ8NI77 898 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF461Q8TAF7 563 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 MDM1Q8TC05 714 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF512Q96ME7 567 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 KREMEN1Q96MU8 473 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 DEF6Q9H4E7 631 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 TRMT1Q9NXH9 659 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 INSL5Q9Y5Q6 135 aa11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-217ENST00000512274 PTPRJQ12913 1337 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TRIP11Q15643 1979 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 A0A0A6YYK5 440 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 PCNX2A6NKB5 2137 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 DPYSL4O14531 572 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 KIF5CO60282 957 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 GZMAP12544 262 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms