RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 WSCD1Q658N2 575 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 ACAD11Q709F0 780 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 TMEM86AQ8N2M4 240 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 USP15Q9Y4E8 981 aaPredicted RBP13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 COL1A2P08123 1366 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 COL18A1P39060 1754 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 MMP3P08254 477 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 KRT4P19013 534 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 LRRC52Q8N7C0 313 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 ALG3Q92685 438 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 SPECC1L-ADORA2AF8WAN1 911 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 CLGNO14967 610 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 CFLARO15519 480 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 JCHAINP01591 159 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 PTPN1P18031 435 aaKnown RBP13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 ZBTB41Q5SVQ8 909 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 LINC00523Q86TU6 105 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 CCNJLQ8IV13 435 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 PRELID2Q8N945 189 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.23
PCDHA4-202ENST00000512229 SMIM35A0A1B0GVV1 85 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 DARSP14868 501 aaKnown RBP13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 ADSSP30520 456 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 LVRNQ6Q4G3 990 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 ST3GAL5Q9UNP4 418 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 APOC4-APOC2K7ER74 178 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 MSCO60682 206 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 SNX2O60749 519 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 APOC2P02655 101 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 KDELR1P24390 212 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 SLC11A2P49281 568 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 STX3Q13277 289 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 TAS2R42Q7RTR8 314 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 WWP1Q9H0M0 922 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 MUC3BQ9H195 1237 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 GRID1Q9ULK0 1009 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 CNTNAP2Q9UHC6 1331 aa13.58□□□□□ -0.24
PCDHA4-202ENST00000512229 NCAM2O15394 837 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 TGM2P21980 687 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 MMP8P22894 467 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 EFEMP1Q12805 493 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 C15orf59Q2T9L4 293 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 TTC39BQ5VTQ0 682 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 SLC25A41Q8N5S1 370 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 NEMP1O14524 444 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PQBP1O60828 265 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 CCR1P32246 355 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 NSUN2Q08J23 767 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 LAMB3Q13751 1172 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 SEC16BQ96JE7 1060 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 LMCD1Q9NZU5 365 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 GPR25O00155 361 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 MAP2K7O14733 419 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 CCDC22O60826 627 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PECAM1P16284 738 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 FECHP22830 423 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 AMPD1P23109 780 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 HIRAP54198 1017 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PIGZQ86VD9 579 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PALB2Q86YC2 1186 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ANKRD52Q8NB46 1076 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 CALML6Q8TD86 181 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ULBP1Q9BZM6 244 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 GGT7Q9UJ14 662 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 USH1CQ9Y6N9 552 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 RIPK2O43353 540 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ZWINTO95229 277 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 IRF1P10914 325 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 BDNFP23560 247 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ETFBP38117 255 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 ZNF143P52747 638 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 JAM2P57087 298 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
PCDHA4-202ENST00000512229 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms