RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
COPS4-210ENST00000511708 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
COPS4-210ENST00000511708 DUSP9Q99956 384 aaKnown RBP12.8□□□□□ -0.36
COPS4-210ENST00000511708 MSTO1Q9BUK6 570 aa12.8□□□□□ -0.36
COPS4-210ENST00000511708 ITM2CQ9NQX7 267 aa12.8□□□□□ -0.36
COPS4-210ENST00000511708 RAD54BQ9Y620 910 aa12.8□□□□□ -0.36
COPS4-210ENST00000511708 AK5Q9Y6K8 562 aa12.8□□□□□ -0.36
COPS4-210ENST00000511708 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
COPS4-210ENST00000511708 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 H0YCG3 227 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 GFRA2O00451 464 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 TRIM66O15016 1216 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 PAPSS1O43252 624 aaPredicted RBP12.79□□□□□ -0.36
COPS4-210ENST00000511708 IL12RB1P42701 662 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 PPP3CCP48454 512 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
COPS4-210ENST00000511708 CLDN6P56747 220 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 MYL7Q01449 175 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 SKAP1Q86WV1 359 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 ERICH1Q86X53 443 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 ENGASEQ8NFI3 743 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 TMEM176AQ96HP8 235 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 SPHK2Q9NRA0 654 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 EIF2B4Q9UI10 523 aaKnown RBP12.79□□□□□ -0.36
COPS4-210ENST00000511708 SNX11Q9Y5W9 270 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 SLCO1B1Q9Y6L6 691 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
COPS4-210ENST00000511708 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 GABRDO14764 452 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 HCRTO43612 131 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 IGLV3-19P01714 112 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 NTRK1P04629 796 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 PNPLA4P41247 253 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 CSRP3P50461 194 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 CCT8P50990 548 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 TARDBPQ13148 414 aaKnown RBP eCLIP12.78□□□□□ -0.36
COPS4-210ENST00000511708 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
COPS4-210ENST00000511708 VSTM1Q6UX27 236 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 TTC9Q92623 222 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 IGSF8Q969P0 613 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 PDRG1Q9NUG6 133 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
COPS4-210ENST00000511708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 SLC28A2O43868 658 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 BRINP1O60477 761 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 CDK4P11802 303 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 ACOT2P49753 483 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 TPMTP51580 245 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 POU5F1Q01860 360 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 LY6DQ14210 128 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 FUT11Q495W5 492 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 FBXL19Q6PCT2 694 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 MKRN2Q9H000 416 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 OSGEPQ9NPF4 335 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.37
COPS4-210ENST00000511708 ANKRD6Q9Y2G4 727 aa12.77□□□□□ -0.37
COPS4-210ENST00000511708 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 H0Y8X5 98 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 CACNG3O60359 315 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 HUS1O60921 280 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 RFPL3O75679 317 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 C1SP09871 688 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 SCP2P22307 547 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 PCSK1P29120 753 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 OXTRP30559 389 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 GRIK1P39086 918 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 GRIA4P48058 902 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 LHX1P48742 406 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 ANO4Q32M45 955 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 C4orf50Q6ZRC1 276 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 NT5DC4Q86YG4 428 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
COPS4-210ENST00000511708 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 DNAJC17Q9NVM6 304 aaKnown RBP12.76□□□□□ -0.37
COPS4-210ENST00000511708 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 EHD2Q9NZN4 543 aa12.76□□□□□ -0.37
COPS4-210ENST00000511708 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
COPS4-210ENST00000511708 TLN1Q9Y490 2541 aaKnown RBP12.76□□□□□ -0.37
COPS4-210ENST00000511708 KCNK3O14649 394 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms