RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 PARD6AQ9NPB6 346 aa7.26□□□□□ -1.25
COPS4-209ENST00000511653 NCDNQ9UBB6 729 aa7.26□□□□□ -1.25
COPS4-209ENST00000511653 PCDHGA2Q9Y5H1 932 aa7.26□□□□□ -1.25
COPS4-209ENST00000511653 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
COPS4-209ENST00000511653 DMXL2Q8TDJ6 3036 aa7.26□□□□□ -1.25
COPS4-209ENST00000511653 CACNA1EQ15878 2313 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 SMIM28A0A1B0GU29 152 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ARHGEF37A1IGU5 675 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 MOSPD3O75425 235 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ABLIM3O94929 683 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 OR52Z1P0C646 297 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 RPA1P27694 616 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZNF174Q15697 407 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 LPAL2Q16609 132 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 FAM78AQ5JUQ0 283 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 SLC8B1Q6J4K2 584 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 FAM20CQ8IXL6 584 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 DAW1Q8N136 415 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 KCT2Q8NC54 265 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ELSPBP1Q96BH3 223 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 BHMT2Q9H2M3 363 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZSCAN32Q9NX65 697 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 GDE1Q9NZC3 331 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 SUSD2Q9UGT4 822 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PFDN2Q9UHV9 154 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 NDRG2Q9UN36 371 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 INSL5Q9Y5Q6 135 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 MYO16Q9Y6X6 1858 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 FREM2Q5SZK8 3169 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PODXLO00592 558 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ABLIM1O14639 778 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PRRG1O14668 218 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 TBC1D4O60343 1298 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 LRG1P02750 347 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 HARSP12081 509 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 GJA1P17302 382 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 GBP1P32455 592 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 MAGEA9P43362 315 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 RPS9P46781 194 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 ATXN1P54253 815 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 ARPP19P56211 112 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ANAPC15P60006 121 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ADCY1Q08828 1119 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 TCEAL1Q15170 157 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PPP2R5AQ15172 486 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ANKRD1Q15327 319 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZNF568Q3ZCX4 644 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 VITQ6UXI7 678 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ALKAL1Q6UXT8 129 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZNF852Q6ZMS4 543 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZNF461Q8TAF7 563 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ATRIPQ8WXE1 791 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 DNASE1L2Q92874 299 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 C18orf25Q96B23 403 aaPredicted RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 ZSWIM3Q96MP5 696 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 UROC1Q96N76 676 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 ACO2Q99798 780 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 TARS2Q9BW92 718 aaKnown RBP7.25□□□□□ -1.25
COPS4-209ENST00000511653 CYP4F11Q9HBI6 524 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PTPRHQ9HD43 1115 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 CEP72Q9P209 647 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 FBXL5Q9UKA1 691 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 TNFSF13BQ9Y275 285 aa7.25□□□□□ -1.25
COPS4-209ENST00000511653 PHLPP2Q6ZVD8 1323 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 PP2D1A8MPX8 630 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 TRAPPC3O43617 180 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 KRT37O76014 449 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 VNN2O95498 520 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 ATF2P15336 505 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 PTPN2P17706 415 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 PROZP22891 400 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 GDI1P31150 447 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 HOXC13P31276 330 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 ADMP35318 185 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 CCT6AP40227 531 aaKnown RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 VIPR2P41587 438 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 NPTX2P47972 431 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 EFNA5P52803 228 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 PEX3P56589 373 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 MAPK7Q13164 816 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 TRIM29Q14134 588 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 SDE2Q6IQ49 451 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 LETMD1Q6P1Q0 360 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 RTL10Q7L3V2 364 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 TCEAL8Q8IYN2 117 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 C4orf32Q8N8J7 132 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 ERMNQ8TAM6 284 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 KIFAP3Q92845 792 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 GATA6Q92908 595 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 RSPRY1Q96DX4 576 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 ZBTB45Q96K62 511 aaPredicted RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 IFT74Q96LB3 600 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 CCDC94Q9BW85 323 aaPredicted RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 BRD9Q9H8M2 597 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 DDX19AQ9NUU7 478 aaKnown RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 ARHGAP28Q9P2N2 729 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 SUCOQ9UBS9 1254 aaKnown RBP7.24□□□□□ -1.25
COPS4-209ENST00000511653 USP18Q9UMW8 372 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms