RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TMEM105Q8N8V8 129 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KDM1BQ8NB78 822 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ZBTB44Q8NCP5 570 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 OR2T3Q8NH03 318 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CASKIN2Q8WXE0 1202 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RAB7BQ96AH8 199 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 HDAC11Q96DB2 347 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 IQCDQ96DY2 449 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TRIM11Q96F44 468 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF578Q96N58 590 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 GBP4Q96PP9 640 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FAM213AQ9BRX8 229 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 PDZD7Q9H5P4 517 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ABCC13Q9NSE7 274 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ADAMTS1Q9UHI8 967 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FNDC3AQ9Y2H6 1198 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MSRB2Q9Y3D2 182 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 OTOFQ9HC10 1997 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 UQCRHLA0A096LP55 91 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SLC12A8A0AV02 714 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 BTBD18B2RXH4 712 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CACNB4O00305 520 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SPTLC2O15270 562 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 P4HA2O15460 535 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RNF40O75150 1001 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FSBPO95073 299 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 PCDH8O95206 1070 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 IGHDP01880 384 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MT-ND3P03897 115 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CYP11A1P05108 521 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 WEE2P0C1S8 567 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TKTP29401 623 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 DDIT3P35638 169 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MXI1P50539 228 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KCNC4Q03721 635 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KRT33BQ14525 404 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 NAA25Q14CX7 972 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 VWA3BQ502W6 1294 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CDCA2Q69YH5 1023 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CENPPQ6IPU0 288 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RINT1Q6NUQ1 792 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TTC23LQ6PF05 361 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ATG14Q6ZNE5 492 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FAM160A2Q8N612 972 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 WDR36Q8NI36 951 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 LNX1Q8TBB1 728 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 GIPC2Q8TF65 315 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KCNE4Q8WWG9 221 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 IRGQQ8WZA9 623 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RAD54LQ92698 747 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ERCC4Q92889 916 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MRFAP1L1Q96HT8 127 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MAGEB10Q96LZ2 347 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FOXQ1Q9C009 403 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 EPB41L1Q9H4G0 881 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FAM204AQ9H8W3 233 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CLIC5Q9NZA1 410 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SUCOQ9UBS9 1254 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SMCHD1A6NHR9 2005 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ATAD5Q96QE3 1844 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 NCANO14594 1321 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MTMR11A4FU01 709 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ENO4A6NNW6 628 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 EIF3CLB5ME19 914 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 LZTS3O60299 673 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RFPL2O75678 378 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 RFPL3O75679 317 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ALPPP05187 535 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 EPHX1P07099 455 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SRPRAP08240 638 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 VIMP08670 466 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 IRF1P10914 325 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CYP2A6P11509 494 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KRT5P13647 590 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 WARSP23381 471 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TARSP26639 723 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 ARL4AP40617 200 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 BRCC3P46736 316 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 GRIA4P48058 902 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 GATMP50440 423 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CYP2J2P51589 502 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 GUCY1B3Q02153 619 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 SPIDRQ14159 915 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MBTPS1Q14703 1052 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 WDR72Q3MJ13 1102 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 CFAP221Q4G0U5 840 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 FAM78AQ5JUQ0 283 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 MANEAQ5SRI9 462 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 C9orf57Q5W0N0 161 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 USP30Q70CQ3 517 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 BZW1Q7L1Q6 419 aaKnown RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 STRADAQ7RTN6 431 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 KDELC2Q7Z4H8 507 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 OTUD7AQ8TE49 926 aaPredicted RBP2.98□□□□□ -1.93
CLOCK-209ENST00000511124 COG1Q8WTW3 980 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 IGSF8Q969P0 613 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 TTC25Q96NG3 672 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 PGLYRP2Q96PD5 576 aa2.98□□□□□ -1.93
CLOCK-209ENST00000511124 EIF3CQ99613 913 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms