RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 KLK13Q9UKR3 277 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 MTMR6Q9Y217 621 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 STARD13Q9Y3M8 1113 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 A0A1W2PQF6 199 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CLIC2O15247 247 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 EIF3DO15371 548 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX41-211ENST00000510171 TGFB1I1O43294 461 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 PHACTR2O75167 634 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 ZNF217O75362 1048 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
DDX41-211ENST00000510171 SYPP08247 313 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
DDX41-211ENST00000510171 HOXB2P14652 356 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 WASP42768 502 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 TUBP50607 506 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CYP2J2P51589 502 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 SLC5A3P53794 718 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 MYL6P60660 151 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 SNRPFP62306 86 aaKnown RBP11.04□□□□□ -0.64
DDX41-211ENST00000510171 AMPD3Q01432 767 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 RING1Q06587 406 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CYP24A1Q07973 514 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 HNRNPDQ14103 355 aaKnown RBP11.04□□□□□ -0.64
DDX41-211ENST00000510171 CHPFQ8IZ52 775 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CHCHD4Q8N4Q1 142 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 XXYLT1Q8NBI6 393 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
DDX41-211ENST00000510171 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CCSER2Q9H7U1 834 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CAPN10Q9HC96 672 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 IL37Q9NZH6 218 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 ATG2BQ96BY7 2078 aa11.04□□□□□ -0.64
DDX41-211ENST00000510171 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 IGHV1OR15-9A0A0B4J2B8 117 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 A0A1W2PQD8 194 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 FAM221BA6H8Z2 402 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 TRIM24O15164 1050 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 ZDHHC11BP0C7U3 371 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 IRF1P10914 325 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 CD59P13987 128 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 NASPP49321 788 aaPredicted RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 CDH8P55286 799 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 FAM193AP78312 1265 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 ASIC1P78348 528 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 ZNF423Q2M1K9 1284 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 GRAMD4Q6IC98 578 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 PAQR9Q6ZVX9 377 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 MIB1Q86YT6 1006 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 TRIML1Q8N9V2 468 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 SNX21Q969T3 373 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 TNIP3Q96KP6 325 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 FAM124BQ9H5Z6 455 aaPredicted RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
DDX41-211ENST00000510171 KBTBD4Q9NVX7 518 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 GMIPQ9P107 970 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 HCN2Q9UL51 889 aa11.03□□□□□ -0.64
DDX41-211ENST00000510171 ABCA7Q8IZY2 2146 aa11.02□□□□□ -0.64
DDX41-211ENST00000510171 FAM92AA1XBS5 289 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 TLR5O60602 858 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 NDUFS2O75306 463 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 AP1G2O75843 785 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 CLSTN1O94985 981 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 NDUFV2P19404 249 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SLC14A1Q13336 389 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 ACAP1Q15027 740 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 PLEKHG6Q3KR16 790 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 FAM26FQ5R3K3 315 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 EGFLAMQ63HQ2 1017 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
DDX41-211ENST00000510171 SLC41A1Q8IVJ1 513 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 RGL4Q8IZJ4 473 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 OR2I1PQ8NGU4 316 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SCFD1Q8WVM8 642 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 WBP2Q969T9 261 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 DHX58Q96C10 678 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 ZNF419Q96HQ0 510 aaPredicted RBP11.02□□□□□ -0.65
DDX41-211ENST00000510171 HSPA12BQ96MM6 686 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms