RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FAM228BP0C875 321 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 DDX6P26196 483 aaKnown RBP eCLIP15.57■□□□□ 0.08
RNF4-213ENST00000509388 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 CCR2P41597 374 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 CYP4F8P98187 520 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 SLC6A3Q01959 620 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 TFF2Q03403 129 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 GFPT1Q06210 699 aaPredicted RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 SLC18A3Q16572 532 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 SLC5A9Q2M3M2 681 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 PRSS36Q5K4E3 855 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 HECTD3Q5T447 861 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 GPR158Q5T848 1215 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 ALKBH5Q6P6C2 394 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 RSRC2Q7L4I2 434 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 OTOP3Q7RTS5 596 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 SCML4Q8N228 414 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 ITFG1Q8TB96 612 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 RNF139Q8WU17 664 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 ING5Q8WYH8 240 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 ACSF2Q96CM8 615 aaPredicted RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 MCRS1Q96EZ8 462 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 TRIM11Q96F44 468 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 CDK5RAP1Q96SZ6 601 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 POMKQ9H5K3 350 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 TASP1Q9H6P5 420 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 NCANO14594 1321 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 YJEFN3A6XGL0 299 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 SOBPA7XYQ1 873 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 E7ENQ6 273 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 GOLGA8SH3BPF8 625 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 GABBR2O75899 941 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 RARGP13631 454 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 CEBPBP17676 345 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 AVPR1AP37288 418 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 GABRB2P47870 512 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 YWHAZP63104 245 aaKnown RBP15.56■□□□□ 0.08
RNF4-213ENST00000509388 ZNF268Q14587 947 aaPredicted RBP15.56■□□□□ 0.08
RNF4-213ENST00000509388 SPA17Q15506 151 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 SMAD2Q15796 467 aaKnown RBP15.56■□□□□ 0.08
RNF4-213ENST00000509388 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 FAM102AQ5T9C2 384 aaPredicted RBP15.56■□□□□ 0.08
RNF4-213ENST00000509388 BSPRYQ5W0U4 402 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 TXNDC8Q6A555 127 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 FAM183BPQ6ZVS7 135 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 MAB21L3Q8N8X9 362 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 CLEC4CQ8WTT0 213 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 FGF13Q92913 245 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 VCPIP1Q96JH7 1222 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 TAS2R14Q9NYV8 317 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 CLIC5Q9NZA1 410 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 GDE1Q9NZC3 331 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 TJP2Q9UDY2 1190 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 CDH7Q9ULB5 785 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 SZT2Q5T011 3432 aa15.56■□□□□ 0.08
RNF4-213ENST00000509388 MTCL1Q9Y4B5 1905 aaKnown RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 TRAV19A0A0A6YYK7 116 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 ANKRD62A6NC57 917 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 HSF2BPO75031 334 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 LTFP02788 710 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 GLI1P08151 1106 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 ZDHHC11BP0C7U3 371 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 MYBL1P10243 752 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 HDCP19113 662 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 RNASE9P60153 205 aaKnown RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 ASTE1Q2TB18 679 aaPredicted RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 SNX30Q5VWJ9 437 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 DNAJC24Q6P3W2 148 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 SCD5Q86SK9 330 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 TMEM150AQ86TG1 271 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 XYLT1Q86Y38 959 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 MCOLN2Q8IZK6 566 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 SELENOOQ9BVL4 669 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 PHF7Q9BWX1 381 aaPredicted RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 ISCUQ9H1K1 167 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 NMUR1Q9HB89 426 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 LUC7LQ9NQ29 371 aaKnown RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 SPTLC3Q9NUV7 552 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 NR2E1Q9Y466 385 aa15.55■□□□□ 0.08
RNF4-213ENST00000509388 ZFP37Q9Y6Q3 630 aaPredicted RBP15.55■□□□□ 0.08
RNF4-213ENST00000509388 TLR5O60602 858 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 MOSPD3O75425 235 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 TADA3O75528 432 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 CKMP06732 381 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 NCAM1P13591 858 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 PFKLP17858 780 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 ABCB4P21439 1286 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 ATP5C1P36542 298 aaKnown RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 TUBP50607 506 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 C10orf120Q5SQS8 335 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 C10orf76Q5T2E6 689 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 OLFML1Q6UWY5 402 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 MON1BQ7L1V2 547 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms