RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 BCAS4Q8TDM0 211 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 TMEM171Q8WVE6 324 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 NR4A3Q92570 626 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 MVB12AQ96EY5 273 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 EDC3Q96F86 508 aaKnown RBP3.79□□□□□ -1.8
GYPB-209ENST00000508618 WDYHV1Q96HA8 205 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 KAZALD1Q96I82 304 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 DPH1Q9BZG8 443 aa3.79□□□□□ -1.8
GYPB-209ENST00000508618 PIH1D1Q9NWS0 290 aaKnown RBP3.79□□□□□ -1.8
GYPB-209ENST00000508618 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.79□□□□□ -1.86e-10■■■■■ 33.8
GYPB-209ENST00000508618 ALG1L2C9J202 215 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 CTIFO43310 598 aaKnown RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 AKAP5P24588 427 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 IL6STP40189 918 aaPredicted RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 ALDH7A1P49419 539 aaKnown RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 MTHFSP49914 203 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 TIRAPP58753 221 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 STIM1Q13586 685 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 CCDC157Q569K6 752 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 MANEAQ5SRI9 462 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 CC2D1BQ5T0F9 858 aaKnown RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 COL23A1Q86Y22 540 aaPredicted RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 NUP88Q99567 741 aaPredicted RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 TRIM54Q9BYV2 358 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 GTPBP4Q9BZE4 634 aaKnown RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 TRIM5Q9C035 493 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 GBA2Q9HCG7 927 aaPredicted RBP3.78□□□□□ -1.8
GYPB-209ENST00000508618 ZSCAN32Q9NX65 697 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 LPAR3Q9UBY5 353 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 USP22Q9UPT9 525 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 CDY1Q9Y6F8 540 aa3.78□□□□□ -1.8
GYPB-209ENST00000508618 PRSS47A8MTI9 375 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 INPPL1O15357 1258 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 USP12O75317 370 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 KATNA1O75449 491 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 SYF2O95926 243 aaKnown RBP3.77□□□□□ -1.81
GYPB-209ENST00000508618 CD63P08962 238 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 CREB1P16220 341 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 CDC25AP30304 524 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 PRKAR1BP31321 381 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 CPA2P48052 419 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 SLC14A1Q13336 389 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 FHL3Q13643 280 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 MFSD13AQ14CX5 517 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 INPP5JQ15735 1006 aaPredicted RBP3.77□□□□□ -1.81
GYPB-209ENST00000508618 ZNF324BQ6AW86 544 aaPredicted RBP3.77□□□□□ -1.81
GYPB-209ENST00000508618 ZNF783Q6ZMS7 281 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 C16orf71Q8IYS4 520 aaPredicted RBP3.77□□□□□ -1.81
GYPB-209ENST00000508618 SLC15A4Q8N697 577 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 NGDNQ8NEJ9 315 aaKnown RBP3.77□□□□□ -1.81
GYPB-209ENST00000508618 ARHGAP39Q9C0H5 1083 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 XPNPEP3Q9NQH7 507 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 NOTCH4Q99466 2003 aa3.77□□□□□ -1.81
GYPB-209ENST00000508618 C2CD4BA6NLJ0 364 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 A8MVJ9 347 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 CLIC1O00299 241 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 EPN2O95208 641 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 FGF3P11487 239 aaPredicted RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 CDK11BP21127 795 aaKnown RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 CCND1P24385 295 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 CDKN1CP49918 316 aaPredicted RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 RAB1AP62820 205 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 FAM110CQ1W6H9 321 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 CAPRIN2Q6IMN6 1127 aaKnown RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 RFX8Q6ZV50 586 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 CATIPQ7Z7H3 387 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 FOXP4Q8IVH2 680 aaPredicted RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 C12orf76Q8N812 135 aaPredicted RBP3.76□□□□□ -1.81
GYPB-209ENST00000508618 PNPLA1Q8N8W4 532 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 PPP2R3CQ969Q6 453 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 SLC25A28Q96A46 364 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 SPC25Q9HBM1 224 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 DECR2Q9NUI1 292 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 TMEM45AQ9NWC5 275 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 MGAT4CQ9UBM8 478 aa3.76□□□□□ -1.81
GYPB-209ENST00000508618 A0A088AWK7 358 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 ACOT8O14734 319 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 CD3EAPO15446 510 aaKnown RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 CCP110O43303 1012 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 SNUPNO95149 360 aaKnown RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 PLAUP00749 431 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 PLA2G2AP14555 144 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 VCAM1P19320 739 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 UQCRC1P31930 480 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 PRTGQ2VWP7 1150 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 PTCHD3Q3KNS1 767 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 GFI1BQ5VTD9 330 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 FAM57BQ71RH2 274 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 RFX6Q8HWS3 928 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 PLBD2Q8NHP8 589 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 DNAJB14Q8TBM8 379 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 JPH3Q8WXH2 748 aaPredicted RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 P2RY11Q96G91 374 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 P2RX7Q99572 595 aaKnown RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 TUBB6Q9BUF5 446 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 MS4A7Q9GZW8 240 aaPredicted RBP3.75□□□□□ -1.81
GYPB-209ENST00000508618 CD93Q9NPY3 652 aa3.75□□□□□ -1.81
GYPB-209ENST00000508618 DNMT3BQ9UBC3 853 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms