RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 DCTN1Q14203 1278 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 MAP9Q49MG5 647 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 FILIP1LQ4L180 1135 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 FLYWCH1Q4VC44 716 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 EPHA10Q5JZY3 1008 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 CCAR2Q8N163 923 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 MIPOL1Q8TD10 442 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 MAGEC3Q8TD91 643 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 KLHL32Q96NJ5 620 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 TIMP4Q99727 224 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 NUP62CLQ9H1M0 184 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 VIPAS39Q9H9C1 493 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 SAP30BPQ9UHR5 308 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 ENTPD2Q9Y5L3 495 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 COL3A1P02461 1466 aaPredicted RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 NSD2O96028 1365 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 KDRP35968 1356 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 GOLGA6L7A0A1B0GV03 622 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 ADM5C9JUS6 153 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 TOR1BO14657 336 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 NDUFS2O75306 463 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 ELFN1P0C7U0 828 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 GPD1P21695 349 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 SH3BGRP55822 239 aaPredicted RBP5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 KRT85P78386 507 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 CDC42EP1Q00587 391 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 MC2RQ01718 297 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 TMED1Q13445 227 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 DYRK1AQ13627 763 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 PREPLQ4J6C6 727 aaPredicted RBP5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC93Q567U6 631 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 GORABQ5T7V8 394 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 FAM43BQ6ZT52 329 aaPredicted RBP5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 ANKRD23Q86SG2 305 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 SDCCAG8Q86SQ7 713 aaPredicted RBP5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 ADGRG5Q8IZF4 528 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 SPC24Q8NBT2 197 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 MYCBPAPQ8TBZ2 947 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 IFI44Q8TCB0 444 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 GOLGA1Q92805 767 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 DTNBP1Q96EV8 351 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 TESK2Q96S53 571 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 PACSIN1Q9BY11 444 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 TMX1Q9H3N1 280 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 NMRK2Q9NPI5 230 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 JKAMPQ9P055 326 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 NEU2Q9Y3R4 380 aa5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 COL14A1Q05707 1796 aaKnown RBP5.05□□□□□ -1.6
PDLIM5-211ENST00000508531 NUP155O75694 1391 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 RPAP1Q9BWH6 1393 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 KIAA1210Q9ULL0 1709 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC195A0A1B0GUA6 201 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 TRIM75PA6NK02 468 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 NEBLO76041 1014 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SUN1O94901 812 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ERBB2P04626 1255 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CD1AP06126 327 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 PPP3CBP16298 524 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 POU3F3P20264 500 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SFPQP23246 707 aaKnown RBP eCLIP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 MAGEA8P43361 318 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ANXA11P50995 505 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 PTPRRQ15256 657 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 TTC22Q5TAA0 569 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ANKRD45Q5TZF3 282 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 PGM2L1Q6PCE3 622 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 TMED8Q6PL24 325 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 RBM43Q6ZSC3 357 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ZNF365Q70YC5 407 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 YTHDF3Q7Z739 585 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 AMIGO2Q86SJ2 522 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC170Q8IYT3 715 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 C17orf53Q8N3J3 647 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CNTD1Q8N815 330 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 TMIEQ8NEW7 156 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 IL17RDQ8NFM7 739 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SSH1Q8WYL5 1049 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SMG7Q92540 1137 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SNX19Q92543 992 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 JADE3Q92613 823 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ANKS1AQ92625 1134 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 HDAC10Q969S8 669 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 SARAFQ96BY9 339 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CHMP4CQ96CF2 233 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 RSRC1Q96IZ7 334 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ZSCAN31Q96LW9 406 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ANKRD27Q96NW4 1050 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 IMPG2Q9BZV3 1241 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 OSBPL5Q9H0X9 879 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 TNMDQ9H2S6 317 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 KMT5AQ9NQR1 393 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CHCHD3Q9NX63 227 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 GGA2Q9UJY4 613 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 ST3GAL5Q9UNP4 418 aa5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 RGPD8O14715 1765 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-211ENST00000508531 CDC42BPGQ6DT37 1551 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms