RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TRIM36Q9NQ86 728 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 PDGFCQ9NRA1 345 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 RIMKLBQ9ULI2 386 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 SMIM35A0A1B0GVV1 85 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 AQP7P3A6NL99 342 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 UBE2Q2LH0YL09 131 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 TP73O15350 636 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 MT-ND5P03915 603 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 PARP1P09874 1014 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 TPH1P17752 444 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 GATMP50440 423 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 STK3Q13188 491 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 KCNAB1Q14722 419 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 FAM187BQ17R55 369 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 CERKLQ49MI3 558 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 PLAG1Q6DJT9 500 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 FMNL3Q8IVF7 1028 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 METTL25Q8N6Q8 603 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 LINC01465Q8N7H1 131 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 FYTTD1Q96QD9 318 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 NRIP3Q9NQ35 241 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 TFCP2L1Q9NZI6 479 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 VPS51Q9UID3 782 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
TOPBP1-206ENST00000508524 EXOC5O00471 708 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 CREB1P16220 341 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 RPL17P18621 184 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 IL1R2P27930 398 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 MCM5P33992 734 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 SLC2A7Q6PXP3 512 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 KRT78Q8N1N4 520 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 ADAMTS18Q8TE60 1221 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 SMCR8Q8TEV9 937 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 SNX22Q96L94 193 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 DDX21Q9NR30 783 aaKnown RBP eCLIP6.35□□□□□ -1.39
TOPBP1-206ENST00000508524 INMTO95050 263 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 MT-CO3P00414 261 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 NTSR1P30989 418 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 ARHGAP25P42331 645 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 DAZAP2Q15038 168 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 ETFDHQ16134 617 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 C11orf87Q6NUJ2 197 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 USP49Q70CQ1 688 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 GLCCI1Q86VQ1 547 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 DGKHQ86XP1 1220 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 IPCEF1Q8WWN9 437 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 ZNF668Q96K58 619 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 PRSS22Q9GZN4 317 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 NUP62CLQ9H1M0 184 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 AS3MTQ9HBK9 375 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 METTL14Q9HCE5 456 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 SNX15Q9NRS6 342 aa6.34□□□□□ -1.39
TOPBP1-206ENST00000508524 WDR17Q8IZU2 1322 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 BTBD19C9JJ37 291 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 TMPRSS11DO60235 418 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 GCATO75600 419 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 BCAR3O75815 825 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 A1BGP04217 495 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 COPB1P53618 953 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 MANEALQ5VSG8 457 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 PNISRQ8TF01 805 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 PHKBQ93100 1093 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 ZC3H10Q96K80 434 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 SELENOOQ9BVL4 669 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 BRIP1Q9BX63 1249 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 UNKQ9C0B0 810 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 KLHL13Q9P2N7 655 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 MGAT4CQ9UBM8 478 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 DNAJB11Q9UBS4 358 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 ZNF212Q9UDV6 495 aa6.33□□□□□ -1.4
TOPBP1-206ENST00000508524 MYO15BQ96JP2 1530 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 CYP2D7A0A087X1C5 515 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 A8MVJ9 347 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 ANXA2P07355 339 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 PHKG2P15735 406 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 DEUP1Q05D60 604 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 LARS2Q15031 903 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 AWAT1Q58HT5 328 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 DENND2CQ68D51 928 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 MIS18BP1Q6P0N0 1132 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 ZNF813Q6ZN06 617 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 ZNF398Q8TD17 642 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 ZDHHC12Q96GR4 267 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 EFHD1Q9BUP0 239 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 ASAP1Q9ULH1 1129 aa6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 SCAF8Q9UPN6 1271 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-206ENST00000508524 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 TMEM232C9JQI7 657 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 ATF7P17544 494 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 HTR7P34969 479 aa6.31□□□□□ -1.4
TOPBP1-206ENST00000508524 COPAP53621 1224 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms