RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FBXO43Q4G163 708 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 RAB41Q5JT25 222 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 TRIM68Q6AZZ1 485 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 LCLAT1Q6UWP7 414 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 GPRIN1Q7Z2K8 1008 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 PIGZQ86VD9 579 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 TTC16Q8NEE8 873 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 CFAP97Q9P2B7 532 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 CNTN6Q9UQ52 1028 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 PATJQ8NI35 1801 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 WDFY4Q6ZS81 3184 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 ARSAP15289 507 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 GJA4P35212 333 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 PLA2G4AP47712 749 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 MFAP3P55082 362 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 CCINQ13939 588 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 CNGA2Q16280 664 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 EXOC3L4Q17RC7 722 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 TMEM196Q5HYL7 178 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 TXNDC11Q6PKC3 985 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 IRF2BP1Q8IU81 584 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 CREBRFQ8IUR6 639 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 SPEM1Q8N4L4 309 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 GPT2Q8TD30 523 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 KCTD13Q8WZ19 329 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 CCSER2Q9H7U1 834 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 PRMT8Q9NR22 394 aaPredicted RBP20.93■□□□□ 0.94
SFXN1-209ENST00000508290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.93■□□□□ 0.94
SFXN1-209ENST00000508290 SMPD4Q9NXE4 827 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 SH3BP1Q9Y3L3 701 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 ANAPC1Q9H1A4 1944 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 F5P12259 2224 aa20.93■□□□□ 0.94
SFXN1-209ENST00000508290 PIEZO1Q92508 2521 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 CYP26A1O43174 497 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 ADH1CP00326 375 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 EEF1GP26641 437 aaKnown RBP20.92■□□□□ 0.94
SFXN1-209ENST00000508290 ZNF132P52740 706 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 ZXDBP98169 803 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 MTAPQ13126 283 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 PON2Q15165 354 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 TRIM65Q6PJ69 517 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 RRAGAQ7L523 313 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 TTC30AQ86WT1 665 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 SCML4Q8N228 414 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 RBBP8NLQ8NC74 664 aaPredicted RBP20.92■□□□□ 0.94
SFXN1-209ENST00000508290 TTC8Q8TAM2 541 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 ZFRQ96KR1 1074 aaKnown RBP20.92■□□□□ 0.94
SFXN1-209ENST00000508290 P2RY13Q9BPV8 354 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 LRRC4Q9HBW1 653 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 APEX2Q9UBZ4 518 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 DNMT3LQ9UJW3 386 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 NAGPAQ9UK23 515 aa20.92■□□□□ 0.94
SFXN1-209ENST00000508290 LSM7Q9UK45 103 aaKnown RBP20.92■□□□□ 0.94
SFXN1-209ENST00000508290 ATG13O75143 517 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 PAPSS2O95340 614 aaPredicted RBP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 SP9P0CG40 484 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 RARGP13631 454 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 EIF2DP41214 584 aaKnown RBP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 NRLP54845 237 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 COL4A3Q01955 1670 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 PDE4CQ08493 712 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 ZNF638Q14966 1978 aaKnown RBP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 PM20D1Q6GTS8 502 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 SASS6Q6UVJ0 657 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 ARHGEF19Q8IW93 802 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 ADGRG2Q8IZP9 1017 aa20.91■□□□□ 0.94
SFXN1-209ENST00000508290 ENOX1Q8TC92 643 aaKnown RBP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 UBE2TQ9NPD8 197 aaPredicted RBP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.91■□□□□ 0.94
SFXN1-209ENST00000508290 HELZP42694 1942 aaKnown RBP20.9■□□□□ 0.94
SFXN1-209ENST00000508290 A0A1W2PQH9 124 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 OTOL1A6NHN0 477 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-209ENST00000508290 MED7O43513 233 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 ZBED1O96006 694 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 TKTL1P51854 596 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 PREPLQ4J6C6 727 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-209ENST00000508290 PKDCCQ504Y2 493 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 HTR3DQ70Z44 454 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 SIX6OS1Q8N1H7 587 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 CD101Q93033 1021 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 KREMEN1Q96MU8 473 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 TUBGCP2Q9BSJ2 902 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 NDST4Q9H3R1 872 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 CNGB3Q9NQW8 809 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 OLA1Q9NTK5 396 aaKnown RBP20.9■□□□□ 0.94
SFXN1-209ENST00000508290 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 PCDHGA2Q9Y5H1 932 aa20.9■□□□□ 0.94
SFXN1-209ENST00000508290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-209ENST00000508290 CXCL12P48061 93 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 MRE11P49959 708 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 COG7P83436 770 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 VWA3BQ502W6 1294 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 C10orf120Q5SQS8 335 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 CCDC183Q5T5S1 534 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 MAML2Q8IZL2 1156 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-209ENST00000508290 KAT5Q92993 513 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 NKD2Q969F2 451 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-209ENST00000508290 HSFY1Q96LI6 401 aa20.89■□□□□ 0.93
SFXN1-209ENST00000508290 KLF16Q9BXK1 252 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-209ENST00000508290 LINC00597Q9H2U6 94 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms