RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 GDE1Q9NZC3 331 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 CEP72Q9P209 647 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 ARHGAP28Q9P2N2 729 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 LRWD1Q9UFC0 647 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 TNFSF13BQ9Y275 285 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 YIPF1Q9Y548 306 aa6.04□□□□□ -1.44
ATXN3-210ENST00000507965 TNRC6BQ9UPQ9 1833 aaKnown RBP6.04□□□□□ -1.44
ATXN3-210ENST00000507965 KMT2BQ9UMN6 2715 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-210ENST00000507965 PTPRDP23468 1912 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TCAF2A6NFQ2 919 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 SLC38A8A6NNN8 435 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 K7ERI5 159 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ARNTLO00327 626 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PPEF2O14830 753 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 SLC16A4O15374 487 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TRAPPC3O43617 180 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 CXCL8P10145 99 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 MCF2P10911 925 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 KCNE1P15382 129 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PTPN2P17706 415 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TGM1P22735 817 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 GDI1P31150 447 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 GDNFP39905 211 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 MAGEA9P43362 315 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 MAPK8P45983 427 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TOB1P50616 345 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 GUCY2FP51841 1108 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 EFNA5P52803 228 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ATXN1P54253 815 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 SATB1Q01826 763 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 IL17AQ16552 155 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TSNAXIP1Q2TAA8 658 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ATG14Q6ZNE5 492 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 Q6ZS52 159 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TMC8Q8IU68 726 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TCEAL8Q8IYN2 117 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 IGSF22Q8N9C0 903 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TTC8Q8TAM2 541 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ATRIPQ8WXE1 791 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 KIFAP3Q92845 792 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 MMTAG2Q9BU76 263 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TRMT61BQ9BVS5 477 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 MRPL4Q9BYD3 311 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 HAPLN2Q9GZV7 340 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 DNAJC25Q9H1X3 360 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 FOXP1Q9H334 677 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 BRD9Q9H8M2 597 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ZFP14Q9HCL3 533 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 ZNF334Q9HCZ1 680 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 KMT5AQ9NQR1 393 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 RBM12Q9NTZ6 932 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 C2orf42Q9NWW7 574 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PPP4R2Q9NY27 417 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 USP18Q9UMW8 372 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PCDHB6Q9Y5E3 794 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 TIMM13Q9Y5L4 95 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PIAS3Q9Y6X2 628 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 PTPRZ1P23471 2315 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 EP300Q09472 2414 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-210ENST00000507965 CEP250Q9BV73 2442 aa6.03□□□□□ -1.44
ATXN3-210ENST00000507965 NPHP3-ACAD11A0A0J9YXS1 232 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 HEPACAM2A8MVW5 462 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SCAMP3O14828 347 aaKnown RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SYN3O14994 580 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SOAT2O75908 522 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 PRAMEF12O95522 483 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 PSMC3P17980 439 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 MUTP22033 750 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 CCNE1P24864 410 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ELF1P32519 619 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 TNFSF9P41273 254 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 EPHA5P54756 1037 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 LMNB2Q03252 620 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 DMP1Q13316 513 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ORC2Q13416 577 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 GNL2Q13823 731 aaKnown RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 NOLC1Q14978 699 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SAFBQ15424 915 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SLC10A6Q3KNW5 377 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ALG1LQ6GMV1 187 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ZNF280DQ6N043 979 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 RINT1Q6NUQ1 792 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 C1orf186Q6ZWK4 172 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 APBB1IPQ7Z5R6 666 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 FBXO18Q8NFZ0 1043 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 FAM3CQ92520 227 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 SMARCD2Q92925 531 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 CCDC120Q96HB5 630 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ZFYVE19Q96K21 471 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 ACAP3Q96P50 834 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 TMEM209Q96SK2 561 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 PLIN2Q99541 437 aa6.02□□□□□ -1.45
ATXN3-210ENST00000507965 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
ATXN3-210ENST00000507965 TCHPQ9BT92 498 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms