RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 E2F6O75461 281 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TSPY4P0CV99 314 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TSPY10P0CW01 314 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MAPK3P27361 379 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 EEF1DP29692 281 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MPLP40238 635 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 CHN2P52757 468 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SLC16A1P53985 500 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ELLP55199 621 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ADKP55263 362 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 HSD17B7P56937 341 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 PHC1P78364 1004 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MXRA7P84157 204 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MPP3Q13368 585 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TRIM25Q14258 630 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 GALEQ14376 348 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 KRT32Q14532 448 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 OASLQ15646 514 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ASIC2Q16515 512 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 GEN1Q17RS7 908 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 BMT2Q1RMZ1 405 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TUBB8Q3ZCM7 444 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 FAM209BQ5JX69 171 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ATAT1Q5SQI0 421 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MFSD14BQ5SR56 506 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 FAM205BPQ63HN1 556 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 IRGCQ6NXR0 463 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 B3GNT9Q6UX72 402 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ANGPTL8Q6UXH0 198 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 UNC5DQ6UXZ4 953 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 MFSD6Q6ZSS7 791 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 RTL10Q7L3V2 364 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 GALNT7Q86SF2 657 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SLC9B2Q86UD5 537 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 LYSMD2Q8IV50 215 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 OR8H3Q8N146 312 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 AVL9Q8NBF6 648 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SMC1BQ8NDV3 1235 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZFP28Q8NHY6 868 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 CTCFLQ8NI51 663 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ADAMTS18Q8TE60 1221 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SMCR8Q8TEV9 937 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SNX33Q8WV41 574 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 RSAD2Q8WXG1 361 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 RFFLQ8WZ73 363 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 HSPH1Q92598 858 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SLC5A5Q92911 643 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 HPS3Q969F9 1004 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SNX21Q969T3 373 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 CFAP36Q96G28 342 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 PHACTR3Q96KR7 559 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 LRFN3Q9BTN0 628 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SPATA5L1Q9BVQ7 753 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 STK31Q9BXU1 1019 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SIL1Q9H173 461 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 C2orf40Q9H1Z8 148 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 VPS37BQ9H9H4 285 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 PREBQ9HCU5 417 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 EMC7Q9NPA0 242 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 PAPOLBQ9NRJ5 636 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ADPRHL2Q9NX46 363 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 GPRC5DQ9NZD1 345 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 SEPT10Q9P0V9 454 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 CALCOCO1Q9P1Z2 691 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TESQ9UGI8 421 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 TLK1Q9UKI8 766 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 CFAP45Q9UL16 551 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 DTNAQ9Y4J8 743 aa3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 ZFP37Q9Y6Q3 630 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 EIF4G1Q04637 1599 aaKnown RBP3.92□□□□□ -1.78
HMGB3P15-201ENST00000507326 GOLGA6L3A6NEY3 463 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 PGPEP1LA6NFU8 196 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 H0Y626 953 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 DDX39AO00148 427 aaKnown RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 GTPBP1O00178 669 aaKnown RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 AP3D1O14617 1153 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 KDM1AO60341 852 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 NEMFO60524 1076 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 TUSC2O75896 110 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 CDKL5O76039 1030 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 RTN3O95197 1032 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 C1RP00736 705 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 RPLP2P05387 115 aaKnown RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 CNTFP26441 200 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 HSPA1LP34931 641 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 ARL3P36405 182 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 IL6STP40189 918 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 ADCYAP1R1P41586 468 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 PRIM2P49643 509 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 CTCFP49711 727 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 ALDH3A2P51648 485 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 POLE2P56282 527 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 SATB1Q01826 763 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 MEF2AQ02078 507 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 BFSP1Q12934 665 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 CHAF1BQ13112 559 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 SNAPC2Q13487 334 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 PPP2R5BQ15173 497 aa3.91□□□□□ -1.78
HMGB3P15-201ENST00000507326 PKN2Q16513 984 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms