RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 IRF1P10914 325 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 CMA1P23946 247 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 TIE1P35590 1138 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 ASPAP45381 313 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 TUBP50607 506 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 MAP3K7CLP57077 242 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 USP39Q53GS9 565 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 EMC10Q5UCC4 262 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 PMS2CLQ68D20 193 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 TMEM92Q6UXU6 159 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 BBS7Q8IWZ6 715 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 IL17RCQ8NAC3 791 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 TAF4BQ92750 862 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 WBP2Q969T9 261 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 OTUB2Q96DC9 234 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 SPATA32Q96LK8 384 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 NACA2Q9H009 215 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 ZDHHC4Q9NPG8 344 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.455e-8■■■■■ 135.3
HMGCS1-204ENST00000507293 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 FAM92AA1XBS5 289 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 SGK1O00141 431 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 TM4SF5O14894 197 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 TLR5O60602 858 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 ALDH1A2O94788 518 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 CAVIN2O95810 425 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 MYL1P05976 194 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 ADORA2BP29275 332 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 GRIA2P42262 883 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 SYKP43405 635 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 PGFP49763 221 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 GAD2Q05329 585 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 RNF43Q68DV7 783 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 GPRIN1Q7Z2K8 1008 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 C11orf74Q86VG3 221 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 UNC93AQ86WB7 457 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 PHTF2Q8N3S3 785 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 C12orf29Q8N999 325 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 JAKMIP2Q96AA8 810 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 TWNKQ96RR1 684 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 CSNK1G1Q9HCP0 422 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.45
HMGCS1-204ENST00000507293 A0A0A0MRY4 1105 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 IKBKBO14920 756 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TULP3O75386 442 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 FAM200BP0CF97 657 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TRIM49P0CI25 452 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TRIM49CP0CI26 452 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 VAMP7P51809 220 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 NDUFA8P51970 172 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 KRT85P78386 507 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 HSF5Q4G112 596 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 CYP2U1Q7Z449 544 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TMEM25Q86YD3 366 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 ETFBKMTQ8IXQ9 262 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 NAT16Q8N8M0 369 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 OLIG1Q8TAK6 271 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 WHAMMQ8TF30 809 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 FBXO44Q9H4M3 255 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 MMRN2Q9H8L6 949 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 APOBEC3GQ9HC16 384 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 POLMQ9NP87 494 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TLR8Q9NR97 1041 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 SPHK2Q9NRA0 654 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 MAPK8IP1Q9UQF2 711 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
HMGCS1-204ENST00000507293 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 TBC1D3BA6NDS4 549 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 MAPK13O15264 365 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 CYP26A1O43174 497 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 ADAM23O75077 832 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 RHOBTB3O94955 611 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 KIF20AO95235 890 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 NR2F2P24468 414 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 GCLMP48507 274 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 DHPSP49366 369 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 NFIL3Q16649 462 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 ANO4Q32M45 955 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 N4BP2L1Q5TBK1 243 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms