RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZNF707Q96C28 371 aaPredicted RBP14.89□□□□□ -0.03
RNF4-208ENST00000507247 TRMT2BQ96GJ1 504 aaKnown RBP14.89□□□□□ -0.03
RNF4-208ENST00000507247 MYRFLQ96LU7 910 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 GAS2L1Q99501 681 aaPredicted RBP14.89□□□□□ -0.03
RNF4-208ENST00000507247 NUP85Q9BW27 656 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 LRRC3Q9BY71 257 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 OSGEPQ9NPF4 335 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 HCFC1R1Q9NWW0 138 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 ZDHHC7Q9NXF8 308 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TRMT1Q9NXH9 659 aaKnown RBP14.89□□□□□ -0.03
RNF4-208ENST00000507247 GMIPQ9P107 970 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TMEM59LQ9UK28 342 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 COG5Q9UP83 839 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 ASB3Q9Y575 518 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 CCDC195A0A1B0GUA6 201 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 A0A1W2PQH9 124 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 SIGLEC16A6NMB1 481 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 TADA3O75528 432 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 PAPLNO95428 1278 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 HNRNPA1P09651 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
RNF4-208ENST00000507247 RPL7AP62424 266 aaKnown RBP14.88□□□□□ -0.03
RNF4-208ENST00000507247 ADAM15Q13444 863 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 C17orf53Q8N3J3 647 aaPredicted RBP14.88□□□□□ -0.03
RNF4-208ENST00000507247 EMC1Q8N766 993 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 SLC35G2Q8TBE7 412 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 KIAA1524Q8TCG1 905 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 IRGQQ8WZA9 623 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 FAM149B1Q96BN6 582 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 ZNF512Q96ME7 567 aaPredicted RBP14.88□□□□□ -0.03
RNF4-208ENST00000507247 MCEEQ96PE7 176 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 SELENOOQ9BVL4 669 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 PRKD2Q9BZL6 878 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 TRIM7Q9C029 511 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 NMUR1Q9HB89 426 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 IL21Q9HBE4 155 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 PARVAQ9NVD7 372 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 DZANK1Q9NVP4 752 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 OSER1Q9NX31 292 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 DPP7Q9UHL4 492 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 ZKSCAN5Q9Y2L8 839 aa14.88□□□□□ -0.03
RNF4-208ENST00000507247 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 BTNL10A8MVZ5 291 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 DLL1O00548 723 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 NRG2O14511 850 aaPredicted RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 TBX10O75333 385 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 LTFP02788 710 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 FYNP06241 537 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 POU2F2P09086 479 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ZDHHC11BP0C7U3 371 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 KRT3P12035 628 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 FLT3P36888 993 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 RNASE9P60153 205 aaKnown RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 OGDHQ02218 1023 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 KIF5AQ12840 1032 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 TCEAL1Q15170 157 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 TAF12Q16514 161 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 EFHC1Q5JVL4 640 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ANKRD54Q6NXT1 300 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ELMSAN1Q6PJG2 1045 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ZNF662Q6ZS27 426 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 TMEM150AQ86TG1 271 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 CCAR2Q8N163 923 aaKnown RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 ELMOD1Q8N336 334 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 MICALL1Q8N3F8 863 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ZNF564Q8TBZ8 553 aaPredicted RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 BTBD6Q96KE9 485 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 SFXN1Q9H9B4 322 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 LZTFL1Q9NQ48 299 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 ASNSD1Q9NWL6 643 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 CTTNBP2NLQ9P2B4 639 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 DNMT3BQ9UBC3 853 aaKnown RBP14.87□□□□□ -0.03
RNF4-208ENST00000507247 SCINQ9Y6U3 715 aa14.87□□□□□ -0.03
RNF4-208ENST00000507247 TMEM191CA6NGB0 347 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 BUB1O43683 1085 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 HSF2BPO75031 334 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 XYLBO75191 536 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 DAB1O75553 588 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 MTA2O94776 668 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 F11P03951 625 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 GLI1P08151 1106 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 RFC1P35251 1148 aaPredicted RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 YWHAGP61981 247 aaKnown RBP eCLIP14.86□□□□□ -0.03
RNF4-208ENST00000507247 YWHAZP63104 245 aaKnown RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 DLX2Q07687 328 aaPredicted RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 COL19A1Q14993 1142 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 RARS2Q5T160 578 aaKnown RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 BSPRYQ5W0U4 402 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 SYCE2Q6PIF2 218 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 TMC5Q6UXY8 1006 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 GAREM2Q75VX8 874 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 MON1AQ86VX9 555 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 RHOT2Q8IXI1 618 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 DEFB106AQ8N104 65 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms