RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	NR3C1	P04150	777 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	PML	P29590	882 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	KIR2DL1	P43626	348 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	DHPS	P49366	369 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	KDSR	Q06136	332 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	LMAN2	Q12907	356 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	ZACN	Q401N2	412 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	TCEAL6	Q6IPX3	200 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	TMEM92	Q6UXU6	159 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	PAQR9	Q6ZVX9	377 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	ACOT1	Q86TX2	421 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	FUK	Q8N0W3	1084 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	CCDC150	Q8NCX0	1101 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	OLIG1	Q8TAK6	271 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	PLEKHO2	Q8TD55	490 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	SLC2A14	Q8TDB8	520 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	TCEAL3	Q969E4	200 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	ZFR	Q96KR1	1074 aa	Known RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	XPO6	Q96QU8	1125 aa	Known RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	CCSER2	Q9H7U1	834 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	CSNK1G1	Q9HCP0	422 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	TMEM9B	Q9NQ34	198 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	SPHK2	Q9NRA0	654 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	GMIP	Q9P107	970 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	LSM7	Q9UK45	103 aa	Known RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	ACACB	O00763	2458 aa		13.58	□□□□□ -0.23
SNHG4-204	ENST00000507197	HELZ	P42694	1942 aa	Known RBP	13.58	□□□□□ -0.23
SNHG4-204	ENST00000507197	LNP1	A1A4G5	178 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	C4orf47	A7E2U8	309 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	SGK1	O00141	431 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	MAPK13	O15264	365 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	ACTN4	O43707	911 aa	Known RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	KLRC4	O43908	158 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	TLR5	O60602	858 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	VNN1	O95497	513 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	FAM200B	P0CF97	657 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	P2RY2	P41231	377 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	PIK3CA	P42336	1068 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	NOVA1	P51513	510 aa	Known RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	DNM1	Q05193	864 aa	Known RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	ANO4	Q32M45	955 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	KMT5B	Q4FZB7	885 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	CEP135	Q66GS9	1140 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	SDE2	Q6IQ49	451 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	SV2A	Q7L0J3	742 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	TADA2B	Q86TJ2	420 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	C12orf40	Q86WS4	652 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	BBS7	Q8IWZ6	715 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	ETFBKMT	Q8IXQ9	262 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	GRAMD1C	Q8IYS0	662 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	PGBD3	Q8N328	593 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	KIAA0895	Q8NCT3	520 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	PIGK	Q92643	395 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	NUSAP1	Q9BXS6	441 aa	Known RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	KCTD10	Q9H3F6	313 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	PNPLA8	Q9NP80	782 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	6e-39	■□□□□ 8.9
SNHG4-204	ENST00000507197	EVL	Q9UI08	416 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	PTPRD	P23468	1912 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	EPG5	Q9HCE0	2579 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	SPAG17	Q6Q759	2223 aa		13.58	□□□□□ -0.24
SNHG4-204	ENST00000507197	TPR	P12270	2363 aa	Known RBP	13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	TCRBV21S2A2	A0A5A6	115 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	TULP3	O75386	442 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	ASS1	P00966	412 aa	Known RBP	13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	IRF1	P10914	325 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	CCDC130	P13994	396 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	BCKDHB	P21953	392 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	CMA1	P23946	247 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	RPL13	P26373	211 aa	Known RBP	13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	HOXD12	P35452	270 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	ATP5C1	P36542	298 aa	Known RBP	13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	NDST1	P52848	882 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	MAP3K7CL	P57077	242 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	DLG4	P78352	724 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	ENPEP	Q07075	957 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	C10orf76	Q5T2E6	689 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	PSAPL1	Q6NUJ1	521 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	HTR3D	Q70Z44	454 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	INTS8	Q75QN2	995 aa	Known RBP	13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	SYT12	Q8IV01	421 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	NAT16	Q8N8M0	369 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	TERB1	Q8NA31	727 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	HMGB4	Q8WW32	186 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	SMO	Q99835	787 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	NT5C1A	Q9BXI3	368 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	SDCBP2	Q9H190	292 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	CYP3A43	Q9HB55	503 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	WDR35	Q9P2L0	1181 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	TRAF3IP3	Q9Y228	551 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	PCDHA5	Q9Y5H7	936 aa		13.57	□□□□□ -0.24
SNHG4-204	ENST00000507197	AP5Z1	O43299	807 aa		13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	HLA-DRA	P01903	254 aa		13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	KRT13	P13646	458 aa		13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	PFKFB1	P16118	471 aa		13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	CSRP1	P21291	193 aa	Known RBP	13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	ASPA	P45381	313 aa		13.56	□□□□□ -0.24
SNHG4-204	ENST00000507197	PSEN1	P49768	467 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms