RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-210	ENST00000506929	FGA	P02671	866 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	NPS	P0C0P6	89 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MYL4	P12829	197 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PHKG2	P15735	406 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RPL17	P18621	184 aa	Known RBP	4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	GABRB3	P28472	473 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	EPHA3	P29320	983 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DIO1	P49895	249 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	LMAN2	Q12907	356 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IFIT5	Q13325	482 aa	Known RBP	4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PROSER3	Q2NL68	480 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ARHGAP15	Q53QZ3	475 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	XRRA1	Q6P2D8	792 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	KIRREL2	Q6UWL6	708 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SLC29A4	Q7RTT9	530 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SRL	Q86TD4	932 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CHSY1	Q86X52	802 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CCDC146	Q8IYE0	955 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TXLNB	Q8N3L3	684 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ABHD11	Q8NFV4	315 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RP9	Q8TA86	221 aa	Known RBP	4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CCDC138	Q96M89	665 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MMS19	Q96T76	1030 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CIPC	Q9C0C6	399 aa		4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TCRBV5S1A1T	A0A578	114 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FAM234B	A2RU67	622 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CGB1	A6NKQ9	187 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FOXN3	O00409	490 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TJP3	O95049	919 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	C1R	P00736	705 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CREB1	P16220	341 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PECAM1	P16284	738 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ABCB4	P21439	1286 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PBX1	P40424	430 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RENBP	P51606	427 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	COPB1	P53618	953 aa	Known RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	COPA	P53621	1224 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MTAP	Q13126	283 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ARL13B	Q3SXY8	428 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	COLEC12	Q5KU26	742 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FCRLB	Q6BAA4	426 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CEP85	Q6P2H3	762 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	KRT28	Q7Z3Y7	464 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	OR2C3	Q8N628	320 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TERB1	Q8NA31	727 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TBC1D5	Q92609	795 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SLC39A13	Q96H72	371 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RITA1	Q96K30	269 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SGCZ	Q96LD1	299 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PCDHAC1	Q9H158	963 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SLC25A32	Q9H2D1	315 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	HEYL	Q9NQ87	328 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	STARD7	Q9NQZ5	370 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ADARB2	Q9NS39	739 aa	Known RBP	4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SLC52A1	Q9NWF4	448 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DNAJB11	Q9UBS4	358 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CDC23	Q9UJX2	597 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	AMFR	Q9UKV5	643 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PAXBP1	Q9Y5B6	917 aa		4.12	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	AQP7P3	A6NL99	342 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	AREL1	O15033	823 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PRAMEF2	O60811	474 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PROP1	O75360	226 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FGF18	O76093	207 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	APEH	P13798	732 aa	Known RBP	4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MPG	P29372	298 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	AK2	P54819	239 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	NHLH1	Q02575	133 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PICALM	Q13492	652 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MPEG1	Q2M385	716 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TMTC4	Q5T4D3	741 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PRAMEF17	Q5VTA0	474 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ABLIM2	Q6H8Q1	611 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TRIM72	Q6ZMU5	477 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CATSPERG	Q6ZRH7	1159 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CCDC28A	Q8IWP9	274 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SDR16C5	Q8N3Y7	309 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SIRT6	Q8N6T7	355 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CCDC136	Q96JN2	1154 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FAM227B	Q96M60	508 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	INO80B	Q9C086	356 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SAP30L	Q9HAJ7	183 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MGAT4C	Q9UBM8	478 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RGS17	Q9UGC6	210 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FRMD4B	Q9Y2L6	1034 aa		4.11	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CLCA1	A8K7I4	914 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PSMD9	O00233	223 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	KCNQ3	O43525	872 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CBFA2T3	O75081	653 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	JTB	O76095	146 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PRKCB	P05771	671 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CYP2D6	P10635	497 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ATF7	P17544	494 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MST1	P26927	711 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	HSPA7	P48741	367 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MTHFS	P49914	203 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SOX10	P56693	466 aa		4.1	□□□□□ -1.75

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