RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PARD3BQ8TEW8 1205 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 NELFBQ8WX92 580 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 UTP4Q969X6 686 aaKnown RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 BORCS6Q96GS4 357 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 HPDLQ96IR7 371 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 ZNF560Q96MR9 790 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 TMEM209Q96SK2 561 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 TSG101Q99816 390 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 SPOCK3Q9BQ16 436 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 LRRC3Q9BY71 257 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 TGIF2Q9GZN2 237 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 NUP62CLQ9H1M0 184 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 S1PR5Q9H228 398 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 R3HCC1Q9Y3T6 440 aaKnown RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 USP15Q9Y4E8 981 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 FAM221AA4D161 298 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 H7C4K7 107 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 PSMA7O14818 248 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 CETN3O15182 167 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 HCRTO43612 131 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 GREM1O60565 184 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 CILPO75339 1184 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 H2AFB2P0C5Z0 115 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 CCNE1P24864 410 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 PSMC2P35998 433 aaKnown RBP10.16□□□□□ -0.78
CLCN3-205ENST00000506924 VAMP7P51809 220 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 MYL6P60660 151 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 ROR1Q01973 937 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 CREMQ03060 361 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
CLCN3-205ENST00000506924 TRPC3Q13507 836 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 MYBPC2Q14324 1141 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 EDRF1Q3B7T1 1238 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 COBLL1Q53SF7 1204 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 SNAP47Q5SQN1 464 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 C1orf220Q5T0J3 134 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 TDRD10Q5VZ19 366 aaKnown RBP10.16□□□□□ -0.78
CLCN3-205ENST00000506924 OVOS1Q6IE37 1185 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 ZNF280DQ6N043 979 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 PDXDC1Q6P996 788 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 LILRA6Q6PI73 481 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 ARMC10Q8N2F6 343 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 SMRP1Q8NCR6 262 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 DHTKD1Q96HY7 919 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-205ENST00000506924 PGLYRP2Q96PD5 576 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 AP4E1Q9UPM8 1137 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 SNX9Q9Y5X1 595 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 BACE2Q9Y5Z0 518 aa10.16□□□□□ -0.78
CLCN3-205ENST00000506924 C5orf42Q9H799 3197 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 CCDC195A0A1B0GUA6 201 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 FSD2A1L4K1 749 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 WDR27A2RRH5 827 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 FANCGO15287 622 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 TBC1D4O60343 1298 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 SEC24AO95486 1093 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 VNN1O95497 513 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 C4BPAP04003 597 aaKnown RBP10.15□□□□□ -0.78
CLCN3-205ENST00000506924 KRT13P13646 458 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 ACAT1P24752 427 aaKnown RBP10.15□□□□□ -0.78
CLCN3-205ENST00000506924 PNPLA4P41247 253 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 GCLMP48507 274 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 FKBP3Q00688 224 aaKnown RBP10.15□□□□□ -0.78
CLCN3-205ENST00000506924 PPP3CAQ08209 521 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 MYO1EQ12965 1108 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 RAB33AQ14088 237 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 SEPT6Q14141 434 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 MPP2Q14168 576 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 NFIL3Q16649 462 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 METTL23Q86XA0 190 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 GPR65Q8IYL9 337 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 PDCL2Q8N4E4 241 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 LRRC52Q8N7C0 313 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 RNF214Q8ND24 703 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 OR10T2Q8NGX3 314 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 SLC7A14Q8TBB6 771 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 TMEM174Q8WUU8 243 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 EZH1Q92800 747 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-205ENST00000506924 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 RTP3Q9BQQ7 232 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 ADAM7Q9H2U9 754 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 SFXN1Q9H9B4 322 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 FBXW11Q9UKB1 542 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 L1RE1Q9UN81 338 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 ACTL7BQ9Y614 415 aa10.15□□□□□ -0.78
CLCN3-205ENST00000506924 TSC2P49815 1807 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 MTCL1Q9Y4B5 1905 aaKnown RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 CCL16O15467 120 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 HUS1O60921 280 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 LRRN2O75325 713 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 OAZ2O95190 189 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 C8AP07357 584 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 EPB41P11171 864 aaKnown RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 DRD2P14416 443 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 HOXB8P17481 243 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-205ENST00000506924 TYMPP19971 482 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 LRRC63Q05C16 580 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 ADCY1Q08828 1119 aa10.14□□□□□ -0.79
CLCN3-205ENST00000506924 PAK1Q13153 545 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms