RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RFX1P22670 979 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 CLCN1P35523 988 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 RGS7P49802 495 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 UBXN1Q04323 297 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 ADIGQ0VDE8 80 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 MTF1Q14872 753 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 ARHGAP29Q52LW3 1261 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 SLC44A4Q53GD3 710 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 SMYD5Q6GMV2 418 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 FBXL6Q8N531 539 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 KCTD13Q8WZ19 329 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 NDRG1Q92597 394 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 ERGIC2Q96RQ1 377 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 TRPV5Q9NQA5 729 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 CYLDQ9NQC7 956 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 FAM207AQ9NSI2 230 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 SMPD4Q9NXE4 827 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 F8VZ95 297 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 LEFTY2O00292 366 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TLR5O60602 858 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TBX18O95935 607 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 MBL2P11226 248 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 GPD2P43304 727 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TNK2Q07912 1038 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 MEA1Q16626 185 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TRIM68Q6AZZ1 485 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 PM20D1Q6GTS8 502 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 SLC47A2Q86VL8 602 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 TBC1D17Q9HA65 648 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 HPS4Q9NQG7 708 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 CYTH4Q9UIA0 394 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 ZNF318Q5VUA4 2279 aa19.19■□□□□ 0.66
PDLIM7-216ENST00000506537 PIK3R2O00459 728 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 TEX33O43247 280 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 ZBED1O96006 694 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 RARGP13631 454 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 VCPP55072 806 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 STARD6P59095 220 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 PLCB2Q00722 1185 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 TPRG1Q6ZUI0 275 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 FLCNQ8NFG4 579 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 WBP2Q969T9 261 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 STK33Q9BYT3 514 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 MFSD1Q9H3U5 465 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 GKN1Q9NS71 199 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 GTSE1Q9NYZ3 720 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 NAGPAQ9UK23 515 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 NUDT5Q9UKK9 219 aa19.18■□□□□ 0.66
PDLIM7-216ENST00000506537 MDM4O15151 490 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 MED7O43513 233 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 LCP1P13796 627 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 ARSAP15289 507 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 SOX9P48436 509 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 RPL34P49207 117 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 PSEN1P49768 467 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 JAM2P57087 298 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 PRKCQQ04759 706 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 SIX6OS1Q8N1H7 587 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 TTC8Q8TAM2 541 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 NAP1L5Q96NT1 182 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 FOXQ1Q9C009 403 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 NLRC4Q9NPP4 1024 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 THG1LQ9NWX6 298 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 CLIC5Q9NZA1 410 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 CFAP97Q9P2B7 532 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 WNT6Q9Y6F9 365 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 PIAS3Q9Y6X2 628 aa19.17■□□□□ 0.66
PDLIM7-216ENST00000506537 WDFY4Q6ZS81 3184 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 OTOL1A6NHN0 477 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 SCAMP3O14828 347 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 PI15O43692 258 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 CAVIN2O95810 425 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 CD72P21854 359 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 DAOAP59103 153 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 YWHAGP61981 247 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 PTK2Q05397 1052 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 SCML4Q8N228 414 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 WDTC1Q8N5D0 677 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 TMEM105Q8N8V8 129 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 CSGALNACT1Q8TDX6 532 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 OSCP1Q8WVF1 389 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 HSFY1Q96LI6 401 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 EBF3Q9H4W6 596 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 CNGB3Q9NQW8 809 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
PDLIM7-216ENST00000506537 A0A1B0GTH6 734 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 YJEFN3A6XGL0 299 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 E7ENQ6 273 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 EML3Q32P44 896 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 ASTLQ6HA08 431 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 CC2D1AQ6P1N0 951 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 KLHDC10Q6PID8 442 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms