RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TRPC7Q9HCX4 862 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 SLC2A4RGQ9NR83 387 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 TLR8Q9NR97 1041 aaKnown RBP7.67□□□□□ -1.18
GYPB-206ENST00000506516 TDP1Q9NUW8 608 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 THG1LQ9NWX6 298 aaKnown RBP7.67□□□□□ -1.18
GYPB-206ENST00000506516 OBP2AQ9NY56 170 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 TAB2Q9NYJ8 693 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 IL37Q9NZH6 218 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 WNT16Q9UBV4 365 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 CHORDC1Q9UHD1 332 aaPredicted RBP7.67□□□□□ -1.18
GYPB-206ENST00000506516 TSPAN16Q9UKR8 245 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 CNTN6Q9UQ52 1028 aa7.67□□□□□ -1.18
GYPB-206ENST00000506516 TSC2P49815 1807 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZNF840PA6NDX5 716 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 TMEM221A6NGB7 291 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 M0R296 226 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZNF263O14978 683 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 XPO1O14980 1071 aaKnown RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 NARSO43776 548 aaKnown RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 CKMP06732 381 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 RFX1P22670 979 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 GDI1P31150 447 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 VIPR2P41587 438 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 KIF11P52732 1056 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 COPB1P53618 953 aaKnown RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 BCAT1P54687 386 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 BPIFB4P59827 614 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 UBXN1Q04323 297 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 KCNMA1Q12791 1236 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZNF268Q14587 947 aaPredicted RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 NCAPHQ15003 741 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 GOLGA7BQ2TAP0 167 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZSCAN23Q3MJ62 389 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 HECTD3Q5T447 861 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 STXBP5Q5T5C0 1151 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 SNX30Q5VWJ9 437 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 CC2D1AQ6P1N0 951 aaPredicted RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 LCLAT1Q6UWP7 414 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 VITQ6UXI7 678 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 BMP8AQ7Z5Y6 402 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 TADA2BQ86TJ2 420 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZMIZ2Q8NF64 920 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 BPIFB1Q8TDL5 484 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 FOXJ1Q92949 421 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 PBXIP1Q96AQ6 731 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 SHDQ96IW2 340 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 CYP2S1Q96SQ9 504 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 FUCA2Q9BTY2 467 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 IRX2Q9BZI1 471 aaPredicted RBP7.66□□□□□ -1.18
GYPB-206ENST00000506516 PLA2G2FQ9BZM2 168 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 NACA2Q9H009 215 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 MFSD1Q9H3U5 465 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 BRD9Q9H8M2 597 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 KIF9Q9HAQ2 790 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 LRRC4Q9HBW1 653 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 TRPV5Q9NQA5 729 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 TMEM30AQ9NV96 361 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 DNAJC12Q9UKB3 198 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 SCML2Q9UQR0 700 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 DAAM1Q9Y4D1 1078 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 PCDHB9Q9Y5E1 797 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 NCANO14594 1321 aa7.66□□□□□ -1.18
GYPB-206ENST00000506516 FAM92AA1XBS5 289 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 HHLA1C9JL84 531 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 GOLGA6L19H0YKK7 550 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 O00370 1275 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 NRG2O14511 850 aaPredicted RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 CHADO15335 359 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SERPINC1P01008 464 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SETSIPP0DME0 302 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 RALAP11233 206 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 UCHL3P15374 230 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ZNF18P17022 549 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 FCARP24071 287 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 GNA15P30679 374 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ZNF132P52740 706 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SH3BP2P78314 561 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 PDE4CQ08493 712 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 BST2Q10589 180 aaKnown RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 GRM2Q14416 872 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 NFKBIBQ15653 356 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ARHGAP29Q52LW3 1261 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SLC44A4Q53GD3 710 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 KLHDC7AQ5VTJ3 777 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 GJB7Q6PEY0 223 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 PIGZQ86VD9 579 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 TTC30AQ86WT1 665 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SUGP1Q8IWZ8 645 aaKnown RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 HOMEZQ8IX15 550 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 DHX40Q8IX18 779 aaKnown RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 ARHGAP18Q8N392 663 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ARL14EPQ8N8R7 260 aaPredicted RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 UBA3Q8TBC4 463 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 CSGALNACT1Q8TDX6 532 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ZNF606Q8WXB4 792 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 KCTD13Q8WZ19 329 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SHC3Q92529 594 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms