RNA–Protein interactions for RNA: ENST00000505795.1

HMGN1P13-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 13, humanhuman

BASIC

Gene HMGN1P13, Length 138 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P13-201ENST00000505795 WDYHV1Q96HA8 205 aa3.42□□□□□ -1.86
HMGN1P13-201ENST00000505795 LMLNQ96KR4 655 aa3.42□□□□□ -1.86
HMGN1P13-201ENST00000505795 HS6ST2Q96MM7 605 aa3.42□□□□□ -1.86
HMGN1P13-201ENST00000505795 GJB4Q9NTQ9 266 aa3.42□□□□□ -1.86
HMGN1P13-201ENST00000505795 TMA7Q9Y2S6 64 aaKnown RBP3.42□□□□□ -1.86
HMGN1P13-201ENST00000505795 C2CD4BA6NLJ0 364 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 PRSS47A8MTI9 375 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 ZNF814B7Z6K7 855 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 MYO1CO00159 1063 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CLIC1O00299 241 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CTIFO43310 598 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 TMPRSS11DO60235 418 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 KATNA1O75449 491 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CREB1P16220 341 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 ARRB2P32121 409 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 IL6STP40189 918 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 GUCY2FP51841 1108 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 PGGT1BP53609 377 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 MFSD13AQ14CX5 517 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 PRTGQ2VWP7 1150 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CCDC157Q569K6 752 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 EARS2Q5JPH6 523 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 DCAF12L1Q5VU92 463 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CAPRIN2Q6IMN6 1127 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CATIPQ7Z7H3 387 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 CUZD1Q86UP6 607 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 SLC15A4Q8N697 577 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 PLBD2Q8NHP8 589 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 EDC3Q96F86 508 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 P2RX7Q99572 595 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 VN1R3Q9BXE9 311 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 TCF20Q9UGU0 1960 aaKnown RBP3.41□□□□□ -1.86
HMGN1P13-201ENST00000505795 INPPL1O15357 1258 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TLX3O43711 291 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 NDUFB8O95169 186 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 IGKV3-20P01619 116 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 FGF3P11487 239 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 HOXB2P14652 356 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TACR3P29371 465 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TIRAPP58753 221 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 RFX8Q6ZV50 586 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TMPRSS12Q86WS5 348 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 C16orf71Q8IYS4 520 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 HIC2Q96JB3 615 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 CDK5RAP3Q96JB5 506 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 GTPBP4Q9BZE4 634 aaKnown RBP3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 ARHGAP39Q9C0H5 1083 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TMX1Q9H3N1 280 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 TMEM45AQ9NWC5 275 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 CPA4Q9UI42 421 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 USP22Q9UPT9 525 aa3.4□□□□□ -1.87
HMGN1P13-201ENST00000505795 FER1L4A9Z1Z3 1794 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 A0A087WYN8 130 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 SPTLC2O15270 562 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 SYF2O95926 243 aaKnown RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 EPHA3P29320 983 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 CDC25AP30304 524 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MCM5P33992 734 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 RECQLP46063 649 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 ARFIP2P53365 341 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TIAL1Q01085 375 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 LMBRD2Q68DH5 695 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 B4GALNT4Q76KP1 1039 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 SPARTQ8N0X7 666 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 DNAJB14Q8TBM8 379 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 WFIKKN2Q8TEU8 576 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 RAPGEF4Q8WZA2 1011 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MIB2Q96AX9 1013 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MTFMTQ96DP5 389 aaKnown RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MVB12AQ96EY5 273 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TRMT61AQ96FX7 289 aaKnown RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 WBP1Q96G27 269 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TM2D2Q9BX73 214 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TRIM5Q9C035 493 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MS4A7Q9GZW8 240 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 MYLK2Q9H1R3 596 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 ARMT1Q9H993 441 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TRIM36Q9NQ86 728 aa3.39□□□□□ -1.87
HMGN1P13-201ENST00000505795 TMEM272A0A1B0GTI8 110 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 RRHO14718 337 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 PLAUP00749 431 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 CD63P08962 238 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 PRKAR1BP31321 381 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 UQCRC1P31930 480 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 ALDH7A1P49419 539 aaKnown RBP3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 CTBP1Q13363 440 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 FAM110CQ1W6H9 321 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 FAM57BQ71RH2 274 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 COL23A1Q86Y22 540 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 MSI2Q96DH6 328 aaKnown RBP3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 SLITRK1Q96PX8 696 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 TRIM54Q9BYV2 358 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 DECR2Q9NUI1 292 aa3.38□□□□□ -1.87
HMGN1P13-201ENST00000505795 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms