RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 IPO4Q8TEX9 1081 aaKnown RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 SETD7Q8WTS6 366 aaKnown RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 NOC3LQ8WTT2 800 aaKnown RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 UCMAQ8WVF2 138 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 DNASE2BQ8WZ79 361 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 SAAL1Q96ER3 474 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 HSPA12BQ96MM6 686 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 MTMR12Q9C0I1 747 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 DNAI2Q9GZS0 605 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 FBXO44Q9H4M3 255 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 PDE11AQ9HCR9 933 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 LSM7Q9UK45 103 aaKnown RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 PCDHGB2Q9Y5G2 931 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 A8MXQ7 604 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TISP43B9A030 160 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TK2O00142 265 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ATP2C2O75185 946 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 GJB3O75712 270 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CDK4P11802 303 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TNNI1P19237 187 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ATICP31939 592 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 USP46P62068 366 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 SNRPFP62306 86 aaKnown RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 KDSRQ06136 332 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TRPC3Q13507 836 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 COL28A1Q2UY09 1125 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CCDC73Q6ZRK6 1079 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 HTR3DQ70Z44 454 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TMPRSS7Q7RTY8 843 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 SFR1Q86XK3 245 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 SCUBE3Q8IX30 993 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 DEFB119Q8N690 84 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CXorf38Q8TB03 319 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TNIP3Q96KP6 325 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 GABRG3Q99928 467 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CHORDC1Q9UHD1 332 aaPredicted RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 CYP8B1Q9UNU6 501 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ZNF510Q9Y2H8 683 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 GON4LQ3T8J9 2241 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
NEDD9-210ENST00000505589 TSC2P49815 1807 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ANK1P16157 1881 aa10.51□□□□□ -0.73
NEDD9-210ENST00000505589 ADAMTS20P59510 1910 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 DMXL2Q8TDJ6 3036 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 A0A1W2PQF6 199 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 CAPN8A6NHC0 703 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 MEI4A8MW99 385 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 FLRT2O43155 660 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 COCHO43405 550 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 STAU1O95793 577 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 ACADMP11310 421 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 IDEP14735 1019 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 CHKAP35790 457 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 ATP5C1P36542 298 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 MATKP42679 507 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 FAM193AP78312 1265 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 AMPD3Q01432 767 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 IFRD2Q12894 506 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 WDR72Q3MJ13 1102 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 MDH1BQ5I0G3 518 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 DBX2Q6ZNG2 339 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 TRAPPC11Q7Z392 1133 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 TADA2BQ86TJ2 420 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 C12orf40Q86WS4 652 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 SLC41A1Q8IVJ1 513 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 LSM14AQ8ND56 463 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 RHBDD1Q8TEB9 315 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 KBTBD7Q8WVZ9 684 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 SYAP1Q96A49 352 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 COL26A1Q96A83 441 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 NUP58Q9BVL2 599 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PCED1AQ9H1Q7 454 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PCIF1Q9H4Z3 704 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 UPF2Q9HAU5 1272 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 TLR8Q9NR97 1041 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 TM7SF3Q9NS93 570 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 OBSL1O75147 1896 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 ANAPC1Q9H1A4 1944 aa10.5□□□□□ -0.73
NEDD9-210ENST00000505589 FASNP49327 2511 aaKnown RBP10.5□□□□□ -0.73
NEDD9-210ENST00000505589 PLXND1Q9Y4D7 1925 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 GOLGA8IPA6NC78 632 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 GOLGA8JA6NMD2 632 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 TIMM44O43615 452 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 DFNA5O60443 496 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 SYNCRIPO60506 623 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms